PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
genome_Dca54353.1 Rosmarinic Acid C4H low borderline
genome_Dca54355.1 Rosmarinic Acid C4H medium pass
genome_Dca54404.1 Rosmarinic Acid C4H medium pass
genome_Dca54668.1 Rosmarinic Acid C4H low borderline
genome_Dca5480.1 Rosmarinic Acid C4H low borderline
genome_Dca55078.1 Rosmarinic Acid C4H low borderline
genome_Dca55195.1 Rosmarinic Acid C4H low borderline
genome_Dca55196.1 Rosmarinic Acid C4H low borderline
genome_Dca56371.1 Rosmarinic Acid C4H low borderline
genome_Dca56409.1 Rosmarinic Acid C4H low borderline
genome_Dca56410.1 Rosmarinic Acid C4H low borderline
genome_Dca56411.1 Rosmarinic Acid C4H low borderline
genome_Dca56413.1 Rosmarinic Acid C4H medium pass
genome_Dca56415.1 Rosmarinic Acid C4H medium pass
genome_Dca56416.1 Rosmarinic Acid C4H low borderline
genome_Dca56418.1 Rosmarinic Acid C4H low borderline
genome_Dca56678.1 Rosmarinic Acid C4H low borderline
genome_Dca57269.1 Rosmarinic Acid C4H low borderline
genome_Dca57283.1 Rosmarinic Acid C4H low borderline
genome_Dca57616.1 Rosmarinic Acid C4H low borderline
genome_Dca58308.1 Rosmarinic Acid C4H low borderline
genome_Dca58572.1 Rosmarinic Acid C4H medium pass
genome_Dca58736.1 Rosmarinic Acid C4H low borderline
genome_Dca58737.1 Rosmarinic Acid C4H medium pass
genome_Dca59031.1 Rosmarinic Acid C4H low borderline
genome_Dca59089.1 Rosmarinic Acid C4H low borderline
genome_Dca59090.1 Rosmarinic Acid C4H low borderline
genome_Dca59092.1 Rosmarinic Acid C4H low borderline
genome_Dca59110.1 Rosmarinic Acid C4H low borderline
genome_Dca59899.1 Rosmarinic Acid C4H low borderline
genome_Dca60402.1 Rosmarinic Acid C4H low borderline
genome_Dca60695.1 Rosmarinic Acid C4H low borderline
genome_Dca6112.1 Rosmarinic Acid C4H low borderline
genome_Dca6114.1 Rosmarinic Acid C4H low borderline
genome_Dca61526.1 Rosmarinic Acid C4H low borderline
genome_Dca61589.1 Rosmarinic Acid C4H low borderline
genome_Dca61859.1 Rosmarinic Acid C4H medium pass
genome_Dca61873.1 Rosmarinic Acid C4H low borderline
genome_Dca6194.1 Rosmarinic Acid C4H low borderline
genome_Dca62.1 Rosmarinic Acid C4H low borderline
genome_Dca62130.1 Rosmarinic Acid C4H medium pass
genome_Dca62132.1 Rosmarinic Acid C4H medium pass
genome_Dca62445.1 Rosmarinic Acid C4H low borderline
genome_Dca62447.1 Rosmarinic Acid C4H low borderline
genome_Dca62449.1 Rosmarinic Acid C4H low borderline
genome_Dca6381.1 Rosmarinic Acid C4H medium pass
genome_Dca6395.1 Rosmarinic Acid C4H low borderline
genome_Dca64.1 Rosmarinic Acid C4H low borderline
genome_Dca6711.1 Rosmarinic Acid C4H medium pass
genome_Dca68.1 Rosmarinic Acid C4H low borderline