PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
genome_Dca39418.1 Flavonoid F3H medium borderline
genome_Dca40417.1 Flavonoid F3H low borderline
genome_Dca40780.1 Flavonoid F3H medium borderline
genome_Dca41009.1 Flavonoid F3H medium borderline
genome_Dca41527.1 Flavonoid F3H medium borderline
genome_Dca41529.1 Flavonoid F3H medium borderline
genome_Dca41606.1 Flavonoid F3H medium borderline
genome_Dca42871.1 Flavonoid F3H low borderline
genome_Dca42899.1 Flavonoid F3H medium borderline
genome_Dca42900.1 Flavonoid F3H medium borderline
genome_Dca43187.1 Flavonoid F3H medium borderline
genome_Dca44047.1 Flavonoid F3H medium borderline
genome_Dca44157.1 Flavonoid F3H medium borderline
genome_Dca45763.1 Flavonoid F3H medium borderline
genome_Dca4594.1 Flavonoid F3H medium borderline
genome_Dca46170.1 Flavonoid F3H medium borderline
genome_Dca47850.1 Flavonoid F3H medium borderline
genome_Dca48999.1 Flavonoid F3H medium borderline
genome_Dca49490.1 Flavonoid F3H low borderline
genome_Dca49503.1 Flavonoid F3H medium pass
genome_Dca49803.1 Flavonoid F3H medium borderline
genome_Dca50414.1 Flavonoid F3H medium borderline
genome_Dca50427.1 Flavonoid F3H medium borderline
genome_Dca50428.1 Flavonoid F3H medium borderline
genome_Dca50429.1 Flavonoid F3H medium borderline
genome_Dca50430.1 Flavonoid F3H medium borderline
genome_Dca50431.1 Flavonoid F3H low borderline
genome_Dca50432.1 Flavonoid F3H medium borderline
genome_Dca50433.1 Flavonoid F3H medium borderline
genome_Dca50434.1 Flavonoid F3H medium borderline
genome_Dca50435.1 Flavonoid F3H medium borderline
genome_Dca50436.1 Flavonoid F3H medium borderline
genome_Dca50437.1 Flavonoid F3H medium borderline
genome_Dca5059.1 Flavonoid F3H medium borderline
genome_Dca50719.1 Flavonoid F3H medium borderline
genome_Dca51088.1 Flavonoid F3H medium borderline
genome_Dca51416.1 Flavonoid F3H medium borderline
genome_Dca52813.1 Flavonoid F3H medium borderline
genome_Dca52814.1 Flavonoid F3H medium borderline
genome_Dca52815.1 Flavonoid F3H medium pass
genome_Dca52816.1 Flavonoid F3H medium borderline
genome_Dca52818.1 Flavonoid F3H medium borderline
genome_Dca52819.1 Flavonoid F3H medium borderline
genome_Dca52820.1 Flavonoid F3H medium borderline
genome_Dca52822.1 Flavonoid F3H medium borderline
genome_Dca52823.1 Flavonoid F3H medium borderline
genome_Dca52824.1 Flavonoid F3H medium borderline
genome_Dca52825.1 Flavonoid F3H medium borderline
genome_Dca52827.1 Flavonoid F3H medium borderline
genome_Dca52828.1 Flavonoid F3H medium borderline