PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
genome_Dca52829.1 Flavonoid F3H medium borderline
genome_Dca52830.1 Flavonoid F3H medium borderline
genome_Dca52831.1 Flavonoid F3H medium borderline
genome_Dca52832.1 Flavonoid F3H medium borderline
genome_Dca52834.1 Flavonoid F3H low borderline
genome_Dca52835.1 Flavonoid F3H medium borderline
genome_Dca52836.1 Flavonoid F3H low borderline
genome_Dca52846.1 Flavonoid F3H medium borderline
genome_Dca53377.1 Flavonoid F3H low borderline
genome_Dca53735.1 Flavonoid F3H medium borderline
genome_Dca55566.1 Flavonoid F3H medium borderline
genome_Dca55724.1 Flavonoid F3H low borderline
genome_Dca55728.1 Flavonoid F3H low borderline
genome_Dca56864.1 Flavonoid F3H medium borderline
genome_Dca57866.1 Flavonoid F3H medium borderline
genome_Dca57883.1 Flavonoid F3H medium borderline
genome_Dca58799.1 Flavonoid F3H medium borderline
genome_Dca59026.1 Flavonoid F3H medium borderline
genome_Dca60215.1 Flavonoid F3H medium borderline
genome_Dca60425.1 Flavonoid F3H low borderline
genome_Dca60816.1 Flavonoid F3H low borderline
genome_Dca60988.1 Flavonoid F3H medium borderline
genome_Dca61044.1 Flavonoid F3H medium borderline
genome_Dca6315.1 Flavonoid F3H low borderline
genome_Dca7460.1 Flavonoid F3H low borderline
genome_Dca7721.1 Flavonoid F3H medium borderline
genome_Dca7921.1 Flavonoid F3H medium borderline
genome_Dca7926.1 Flavonoid F3H medium borderline
genome_Dca8895.1 Flavonoid F3H medium borderline
genome_Dca8896.1 Flavonoid F3H medium borderline
genome_Dca9140.1 Flavonoid F3H medium borderline
genome_Dca9700.1 Flavonoid F3H medium borderline
genome_Dca9894.1 Flavonoid F3H medium pass
genome_Dca18937.1 Flavonoid FLS low borderline
genome_Dca35027.1 Flavonoid FLS low borderline
genome_Dca1073.1 Flavonoid FNS medium borderline
genome_Dca12312.1 Flavonoid FNS medium borderline
genome_Dca12315.1 Flavonoid FNS medium borderline
genome_Dca15656.1 Flavonoid FNS medium borderline
genome_Dca19802.1 Flavonoid FNS medium borderline
genome_Dca22367.1 Flavonoid FNS medium borderline
genome_Dca25993.1 Flavonoid FNS low borderline
genome_Dca30442.1 Flavonoid FNS medium borderline
genome_Dca35404.1 Flavonoid FNS medium borderline
genome_Dca40459.1 Flavonoid FNS medium borderline
genome_Dca40491.1 Flavonoid FNS medium borderline
genome_Dca42344.1 Flavonoid FNS medium borderline
genome_Dca48125.1 Flavonoid FNS medium borderline
genome_Dca4951.1 Flavonoid FNS medium borderline
genome_Dca51994.1 Flavonoid FNS medium borderline