PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
genome_Dca5441.1 Flavonoid FNS low borderline
genome_Dca55078.1 Flavonoid FNS medium borderline
genome_Dca56678.1 Flavonoid FNS medium borderline
genome_Dca58736.1 Flavonoid FNS medium borderline
genome_Dca6395.1 Flavonoid FNS medium borderline
genome_Dca8641.1 Flavonoid FNS medium borderline
genome_Dca10240.1 Flavonoid IFR low borderline
genome_Dca10242.1 Flavonoid IFR low borderline
genome_Dca10756.1 Flavonoid IFR low borderline
genome_Dca11032.1 Flavonoid IFR low borderline
genome_Dca13523.1 Flavonoid IFR low borderline
genome_Dca14686.1 Flavonoid IFR low borderline
genome_Dca15011.1 Flavonoid IFR low borderline
genome_Dca19342.1 Flavonoid IFR high pass
genome_Dca20404.1 Flavonoid IFR high pass
genome_Dca21815.1 Flavonoid IFR low borderline
genome_Dca22879.1 Flavonoid IFR low borderline
genome_Dca23443.1 Flavonoid IFR low borderline
genome_Dca24133.1 Flavonoid IFR medium pass
genome_Dca25590.1 Flavonoid IFR high pass
genome_Dca27403.1 Flavonoid IFR high pass
genome_Dca28693.1 Flavonoid IFR high pass
genome_Dca31531.1 Flavonoid IFR low borderline
genome_Dca33034.1 Flavonoid IFR low borderline
genome_Dca34070.1 Flavonoid IFR low borderline
genome_Dca35328.1 Flavonoid IFR low borderline
genome_Dca36983.1 Flavonoid IFR high pass
genome_Dca38062.1 Flavonoid IFR low borderline
genome_Dca39616.1 Flavonoid IFR low borderline
genome_Dca42612.1 Flavonoid IFR low borderline
genome_Dca44002.1 Flavonoid IFR low borderline
genome_Dca44002.2 Flavonoid IFR low borderline
genome_Dca4984.1 Flavonoid IFR low borderline
genome_Dca50425.1 Flavonoid IFR low borderline
genome_Dca51617.1 Flavonoid IFR low borderline
genome_Dca54814.1 Flavonoid IFR medium pass
genome_Dca57975.1 Flavonoid IFR medium pass
genome_Dca62340.1 Flavonoid IFR low borderline
genome_Dca62378.1 Flavonoid IFR high pass
genome_Dca62379.1 Flavonoid IFR high pass
genome_Dca62395.1 Flavonoid IFR low borderline
genome_Dca8986.1 Flavonoid IFR low borderline
genome_Dca10101.1 Flavonoid IFS medium borderline
genome_Dca12194.1 Flavonoid IFS medium borderline
genome_Dca12313.1 Flavonoid IFS medium borderline
genome_Dca12316.1 Flavonoid IFS medium pass
genome_Dca12317.1 Flavonoid IFS medium borderline
genome_Dca12318.1 Flavonoid IFS medium borderline
genome_Dca12319.1 Flavonoid IFS medium borderline
genome_Dca12320.1 Flavonoid IFS medium borderline