PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch00123540 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
FanaFAN_r2.3ch00124380 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00127180 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
FanaFAN_r2.3ch00128720 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
FanaFAN_r2.3ch00128730 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00130710 Terpenoid BAHD low borderline BAHD__00093__sp_Q9SV07_ASAT1_ARATH
FanaFAN_r2.3ch00132490 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
FanaFAN_r2.3ch00137350 Terpenoid BAHD medium pass BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
FanaFAN_r2.3ch00138340 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00138460 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00140220 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
FanaFAN_r2.3ch00141080 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
FanaFAN_r2.3ch00146160 Terpenoid BAHD low borderline BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00146370 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
FanaFAN_r2.3ch00147390 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00147980 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00148760 Terpenoid BAHD low borderline BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00150440 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00150880 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00153520 Terpenoid BAHD medium pass BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
FanaFAN_r2.3ch00153930 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
FanaFAN_r2.3ch00155750 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00156760 Terpenoid BAHD low borderline BAHD__00022__sp_K7PEY4_RAM2_MEDTR
FanaFAN_r2.3ch00162530 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
FanaFAN_r2.3ch00163550 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00164390 Terpenoid BAHD medium pass BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
FanaFAN_r2.3ch00167910 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00168030 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00170110 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00171820 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00174620 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00176230 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
FanaFAN_r2.3ch00177880 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00178500 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
FanaFAN_r2.3ch00180570 Terpenoid BAHD low borderline BAHD__00022__sp_K7PEY4_RAM2_MEDTR
FanaFAN_r2.3ch00180620 Terpenoid BAHD low borderline BAHD__00022__sp_K7PEY4_RAM2_MEDTR
FanaFAN_r2.3ch00182690 Terpenoid BAHD low borderline BAHD__00061__sp_Q8VYS8_ZDH24_ARATH
FanaFAN_r2.3ch00187040 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00187060 Terpenoid BAHD low borderline BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00187140 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00191280 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
FanaFAN_r2.3ch00197180 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00197210 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
FanaFAN_r2.3ch00197640 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
FanaFAN_r2.3ch00205440 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
FanaFAN_r2.3ch00205830 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
FanaFAN_r2.3ch00213300 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
FanaFAN_r2.3ch00213460 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
FanaFAN_r2.3ch00215460 Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
FanaFAN_r2.3ch00216950 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA