PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FPPS
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Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch00011720 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch00011730 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch00014130 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch00079530 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch00109790 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch00110320 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch00110390 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch00114560 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch00127470 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch00273650 Terpenoid FPPS medium pass FPPS__00009__sp_Q7XYS9_FPPS1_ARTSI
FanaFAN_r2.3ch1X1a0431280 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch1X1b0448990 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch1X2a0472800 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch1X2b0485010 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch2Ava0522840 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch2Avb0556620 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch2Bia0577620 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch2Bib0600600 Terpenoid FPPS medium pass FPPS__00001__sp_B8XA40_ZFPS_SOLHA
FanaFAN_r2.3ch2X1a0613990 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch2X1b0641870 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch3Ava0683880 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch3Avb0714620 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch3Avb0732740 Terpenoid FPPS medium borderline FPPS__00005__sp_P34802_GGPP1_ARATH
FanaFAN_r2.3ch3Bia0751840 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch3Bib0764620 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch3X1a0771080 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch3X1a0804420 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch3X1a0807690 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch3X1b0810300 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch3X1b0844990 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch3X1b0848050 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch3X2a0850790 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch3X2a0870340 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch3X2b0872710 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch3X2b0892270 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch4X2a1026130 Terpenoid FPPS low borderline FPPS__00005__sp_P34802_GGPP1_ARATH
FanaFAN_r2.3ch6X2a1450320 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
FanaFAN_r2.3ch7Ava1512780 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch7Avb1542890 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch7X1a1608370 Terpenoid FPPS medium pass FPPS__00001__sp_B8XA40_ZFPS_SOLHA
FanaFAN_r2.3ch7X1b1633840 Terpenoid FPPS medium pass FPPS__00001__sp_B8XA40_ZFPS_SOLHA
FanaFAN_r2.3ch7X2a1655780 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch7X2b1677140 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC