Fragaria ananassa (fragaria_ananassa)
Imported from atlas release summary for Fragaria ananassa.
6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
6888
Candidate Genes
C4H
6.45%
BAHD
5.82%
C3'H/CYP98A
5.27%
UGT
4.25%
7DLGT
3.87%
IFS
3.76%
UFGT
3.72%
4CL
3.64%
Other Families
63.21%
More Families (98)
POD
654
3.51%
CYP76
643
3.45%
F3H
516
2.77%
T3O
492
2.64%
NMT
459
2.46%
DWF4/CYP90B1
383
2.06%
STR
380
2.04%
BR6OX2/CYP85A2
367
1.97%
F3'H/CYP75B
354
1.9%
CAD
323
1.73%
CODM/T6ODM
319
1.71%
H6H
319
1.71%
CAS
265
1.42%
TPS
257
1.38%
SMT1/SMT2/SMT3
252
1.35%
CSE
240
1.29%
GES
229
1.23%
CYP71
195
1.05%
CYP90D1
188
1.01%
TRI/TRII
187
1.0%
7DLH
182
0.98%
GS
177
0.95%
LAC
177
0.95%
HCT
173
0.93%
IFR
168
0.9%
T16H
164
0.88%
G8O/G8H
160
0.86%
SLS
155
0.83%
IO
149
0.8%
TAT
146
0.78%
F5H/CYP84A
142
0.76%
FNS
131
0.7%
PYKS
130
0.7%
PMT
121
0.65%
CCR
121
0.65%
SGD
119
0.64%
F3'5'H/CYP75A
118
0.63%
COMT
118
0.63%
RAS
110
0.59%
ANR
106
0.57%
BR6OX1/CYP85A1
94
0.5%
COR
90
0.48%
DFR
89
0.48%
BBE
83
0.45%
SQE
77
0.41%
NCS
73
0.39%
LAMT
72
0.39%
ANS/LDOX
71
0.38%
CPD/CYP90A1
66
0.35%
8HGO
63
0.34%
PAL
60
0.32%
16OMT
58
0.31%
ROT3/CYP90C1
53
0.28%
CCoAOMT
52
0.28%
CNMT
49
0.26%
AACT
48
0.26%
HMGR
47
0.25%
FPPS
43
0.23%
MPO
42
0.23%
CHS
37
0.2%
ISY
34
0.18%
CPR
34
0.18%
SQS/FDFT1
34
0.18%
CYP51G1
34
0.18%
MVK
33
0.18%
DET2
32
0.17%
HPPR
27
0.14%
CYP719
26
0.14%
TYDC_DDC
26
0.14%
GGPPS
24
0.13%
MVD
24
0.13%
CYP80B1
23
0.12%
SMO1/SMO2
22
0.12%
DXS
22
0.12%
MCT/IspD
18
0.1%
6OMT_4OMT_SOMT
16
0.09%
ADC
14
0.08%
CHI
14
0.08%
IDI
14
0.08%
DWF1
13
0.07%
TDC
11
0.06%
ODC
10
0.05%
PMK
10
0.05%
DWF5
9
0.05%
CMK/IspE
9
0.05%
DXR
9
0.05%
HYD1
8
0.04%
HMGS
8
0.04%
CPI1
7
0.04%
FK
7
0.04%
HDS/IspG
7
0.04%
MDS/IspF
7
0.04%
FLS
6
0.03%
DWF7
6
0.03%
HDR/IspH
6
0.03%
CYP80F1
4
0.02%
XMT_MXMT_DXMT
4
0.02%
GPPS
3
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 2064 | 19 | BAHD (739) | View species results |
| Alkaloid pathway | 1625 | 26 | 7DLGT (289) | View species results |
| Phenylpropanoid pathway | 1318 | 12 | POD (533) | View species results |
| Flavonoid pathway | 924 | 14 | UFGT (635) | View species results |
| Rosmarinic acid pathway | 482 | 7 | C4H (166) | View species results |
| Steroid pathway | 475 | 15 | CAS (191) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 6875 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 1366 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| FanaFAN_r2.3ch00000650 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| FanaFAN_r2.3ch00002920 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| FanaFAN_r2.3ch00009510 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| FanaFAN_r2.3ch00016710 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| FanaFAN_r2.3ch00019880 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| FanaFAN_r2.3ch00021370 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| FanaFAN_r2.3ch00021960 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| FanaFAN_r2.3ch00024010 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| FanaFAN_r2.3ch00025570 | Alkaloid | NMT | low | borderline | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| FanaFAN_r2.3ch00027630 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| FanaFAN_r2.3ch00032670 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| FanaFAN_r2.3ch00037300 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| FanaFAN_r2.3ch00039430 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| FanaFAN_r2.3ch00063760 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| FanaFAN_r2.3ch00068630 | Alkaloid | NMT | medium | borderline | NMT__00058__sp_Q9FZN8_TCS1_CAMSI |
| FanaFAN_r2.3ch00072000 | Alkaloid | NMT | medium | borderline | NMT__00058__sp_Q9FZN8_TCS1_CAMSI |
| FanaFAN_r2.3ch00072210 | Alkaloid | NMT | medium | borderline | NMT__00058__sp_Q9FZN8_TCS1_CAMSI |
| FanaFAN_r2.3ch00072890 | Alkaloid | NMT | low | borderline | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| FanaFAN_r2.3ch00074440 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| FanaFAN_r2.3ch00077780 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| FanaFAN_r2.3ch00079030 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| FanaFAN_r2.3ch00082860 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| FanaFAN_r2.3ch00084350 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| FanaFAN_r2.3ch00087150 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| FanaFAN_r2.3ch00094500 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| FanaFAN_r2.3ch00097130 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| FanaFAN_r2.3ch00108930 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| FanaFAN_r2.3ch00117430 | Alkaloid | NMT | low | borderline | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| FanaFAN_r2.3ch00124840 | Alkaloid | NMT | low | borderline | NMT__00045__sp_Q8VYX1_PEAM1_WHEAT |
| FanaFAN_r2.3ch00132050 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| FanaFAN_r2.3ch00135450 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| FanaFAN_r2.3ch00135830 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| FanaFAN_r2.3ch00138490 | Alkaloid | NMT | low | borderline | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| FanaFAN_r2.3ch00138760 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| FanaFAN_r2.3ch00142320 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| FanaFAN_r2.3ch00142480 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| FanaFAN_r2.3ch00143250 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| FanaFAN_r2.3ch00149830 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| FanaFAN_r2.3ch00154470 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| FanaFAN_r2.3ch00155370 | Alkaloid | NMT | medium | borderline | NMT__00029__sp_Q42963_PMT1_TOBAC |
| FanaFAN_r2.3ch00157560 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| FanaFAN_r2.3ch00168360 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| FanaFAN_r2.3ch00169190 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| FanaFAN_r2.3ch00169570 | Alkaloid | NMT | low | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| FanaFAN_r2.3ch00170390 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| FanaFAN_r2.3ch00170580 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| FanaFAN_r2.3ch00177690 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| FanaFAN_r2.3ch00180250 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| FanaFAN_r2.3ch00180810 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| FanaFAN_r2.3ch00180910 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |