PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
FanaFAN_r2.3ch00002800 Flavonoid UFGT high pass
FanaFAN_r2.3ch00003540 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00008680 Flavonoid UFGT high pass
FanaFAN_r2.3ch00010040 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00014340 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00014350 Flavonoid UFGT high pass
FanaFAN_r2.3ch00015670 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00017950 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00020140 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00025500 Flavonoid UFGT high pass
FanaFAN_r2.3ch00026790 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00027960 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00043940 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00059530 Flavonoid UFGT high pass
FanaFAN_r2.3ch00059540 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00060840 Flavonoid UFGT low borderline
FanaFAN_r2.3ch00065040 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00065070 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00065090 Flavonoid UFGT high pass
FanaFAN_r2.3ch00065560 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00066790 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00069840 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00071000 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00077950 Flavonoid UFGT high pass
FanaFAN_r2.3ch00088670 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00088680 Flavonoid UFGT high pass
FanaFAN_r2.3ch00095230 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00095920 Flavonoid UFGT high pass
FanaFAN_r2.3ch00096140 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00108150 Flavonoid UFGT high pass
FanaFAN_r2.3ch00126750 Flavonoid UFGT high pass
FanaFAN_r2.3ch00127380 Flavonoid UFGT high pass
FanaFAN_r2.3ch00132400 Flavonoid UFGT high pass
FanaFAN_r2.3ch00133390 Flavonoid UFGT low borderline
FanaFAN_r2.3ch00133400 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00133690 Flavonoid UFGT high pass
FanaFAN_r2.3ch00139760 Flavonoid UFGT high pass
FanaFAN_r2.3ch00143560 Flavonoid UFGT low borderline
FanaFAN_r2.3ch00145510 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00145520 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00149640 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00149650 Flavonoid UFGT high pass
FanaFAN_r2.3ch00170330 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00170380 Flavonoid UFGT high pass
FanaFAN_r2.3ch00179190 Flavonoid UFGT high pass
FanaFAN_r2.3ch00193950 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00195820 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00196110 Flavonoid UFGT medium pass
FanaFAN_r2.3ch00198590 Flavonoid UFGT high pass
FanaFAN_r2.3ch00199900 Flavonoid UFGT medium pass