PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch00002010 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch00035280 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch00048980 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00051220 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00055800 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00066880 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00066890 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00066920 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00066930 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00066950 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00079780 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00100700 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00113060 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00127890 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00127970 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00136410 Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
FanaFAN_r2.3ch00138060 Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
FanaFAN_r2.3ch00140000 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch00143520 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00145760 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
FanaFAN_r2.3ch00145780 Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
FanaFAN_r2.3ch00151820 Steroid CAS medium pass CAS__00006__sp_Q2XPU6_CAS1_RICCO
FanaFAN_r2.3ch00158050 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch00172140 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch00176430 Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
FanaFAN_r2.3ch00176780 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch00177020 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch00214780 Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH
FanaFAN_r2.3ch00237870 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00242610 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch00275990 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00277840 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00277910 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00288270 Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
FanaFAN_r2.3ch00318590 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00324850 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch00327780 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00333030 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00336620 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch00339320 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch00339330 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch00343530 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch00344640 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch1Ava0347350 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch1Ava0356730 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch1Ava0357810 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch1Ava0369430 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch1Avb0372880 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch1Avb0378240 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch1Avb0379430 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA