PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch5Bib1160520 Steroid CAS low borderline CAS__00012__sp_Q9FN48_CAS_ARATH
FanaFAN_r2.3ch5X1a1183880 Steroid CAS low borderline CAS__00012__sp_Q9FN48_CAS_ARATH
FanaFAN_r2.3ch5X1a1197900 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch5X1b1203920 Steroid CAS low borderline CAS__00011__sp_Q8W3Z4_CAS1_BETPL
FanaFAN_r2.3ch5X1b1208290 Steroid CAS low borderline CAS__00012__sp_Q9FN48_CAS_ARATH
FanaFAN_r2.3ch5X1b1222660 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av1a1247170 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Av1a1247210 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Av1a1247220 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Av1a1247260 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Av1a1253660 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av1b1263050 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Av1b1263090 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Av1b1263100 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Av1b1263120 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Av1b1264970 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av1b1269410 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av2a1280820 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6Av2a1280900 Steroid CAS low borderline CAS__00005__sp_P38605_CAS1_ARATH
FanaFAN_r2.3ch6Av2a1280910 Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
FanaFAN_r2.3ch6Av2a1280930 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6Av2a1286440 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av2a1286460 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av2a1286530 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av2a1286540 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av2a1286550 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av2a1287950 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av2b1299970 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6Av2b1300010 Steroid CAS low borderline CAS__00004__sp_O82139_CAS1_PANGI
FanaFAN_r2.3ch6Av2b1300020 Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
FanaFAN_r2.3ch6Av2b1300030 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6Av2b1305840 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av2b1305860 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av2b1305930 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av2b1305950 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av2b1305960 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Av2b1307490 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Bia1317320 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Bia1317370 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Bia1317390 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Bia1319050 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Bia1322920 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Bia1342040 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
FanaFAN_r2.3ch6Bia1342050 Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
FanaFAN_r2.3ch6Bia1342060 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6Bia1342860 Steroid CAS medium pass CAS__00006__sp_Q2XPU6_CAS1_RICCO
FanaFAN_r2.3ch6Bib1355890 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Bib1355920 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Bib1355960 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6Bib1357510 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA