PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch6Bib1361540 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6Bib1380090 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6Bib1380130 Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
FanaFAN_r2.3ch6Bib1380140 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
FanaFAN_r2.3ch6Bib1380170 Steroid CAS medium pass CAS__00013__sp_Q9SLP9_CAS1_LUFAE
FanaFAN_r2.3ch6X1a1392390 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X1a1407480 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6X1a1407490 Steroid CAS medium pass CAS__00002__sp_E2IUB0_CASS_KALDA
FanaFAN_r2.3ch6X1a1407540 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
FanaFAN_r2.3ch6X1a1407550 Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
FanaFAN_r2.3ch6X1a1407560 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6X1a1412630 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X1a1412650 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X1a1412740 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X1b1420710 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X1b1434500 Steroid CAS low borderline CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6X1b1434550 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
FanaFAN_r2.3ch6X1b1434560 Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
FanaFAN_r2.3ch6X1b1434580 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6X1b1439830 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X1b1439840 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X1b1439970 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X1b1441420 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X2a1448470 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6X2a1448490 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6X2a1448520 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6X2a1448530 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6X2a1448550 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6X2a1454510 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X2b1459120 Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6X2b1459140 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6X2b1459160 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
FanaFAN_r2.3ch6X2b1464440 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X3a1466790 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6X3a1466820 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6X3a1466870 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
FanaFAN_r2.3ch6X3a1466890 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6X3a1471980 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X3a1471990 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X3a1472000 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X3a1472080 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X3a1473410 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X3b1475530 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6X3b1475580 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
FanaFAN_r2.3ch6X3b1475590 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
FanaFAN_r2.3ch6X3b1476570 Steroid CAS medium pass CAS__00006__sp_Q2XPU6_CAS1_RICCO
FanaFAN_r2.3ch6X3b1480720 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X3b1480730 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X3b1480750 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
FanaFAN_r2.3ch6X3b1480760 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA