PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch00139800 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
FanaFAN_r2.3ch00139870 Terpenoid CYP76 medium pass CYP76__00024__sp_W0FKI0_DOX1_PERHD
FanaFAN_r2.3ch00141020 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
FanaFAN_r2.3ch00143080 Terpenoid CYP76 medium borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
FanaFAN_r2.3ch00144360 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
FanaFAN_r2.3ch00144370 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
FanaFAN_r2.3ch00145920 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
FanaFAN_r2.3ch00147310 Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
FanaFAN_r2.3ch00149230 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
FanaFAN_r2.3ch00151370 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
FanaFAN_r2.3ch00151380 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
FanaFAN_r2.3ch00152500 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
FanaFAN_r2.3ch00153010 Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
FanaFAN_r2.3ch00153890 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
FanaFAN_r2.3ch00155020 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
FanaFAN_r2.3ch00156960 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
FanaFAN_r2.3ch00156980 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
FanaFAN_r2.3ch00160790 Terpenoid CYP76 low borderline CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ
FanaFAN_r2.3ch00173410 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
FanaFAN_r2.3ch00175120 Terpenoid CYP76 low borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
FanaFAN_r2.3ch00176250 Terpenoid CYP76 medium pass CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
FanaFAN_r2.3ch00176280 Terpenoid CYP76 medium pass CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
FanaFAN_r2.3ch00181620 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
FanaFAN_r2.3ch00181630 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
FanaFAN_r2.3ch00181640 Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
FanaFAN_r2.3ch00187370 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
FanaFAN_r2.3ch00187590 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
FanaFAN_r2.3ch00192520 Terpenoid CYP76 medium pass CYP76__00015__sp_P0DKI2_C76AN_BETVU
FanaFAN_r2.3ch00193020 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
FanaFAN_r2.3ch00193080 Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
FanaFAN_r2.3ch00193140 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
FanaFAN_r2.3ch00193580 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
FanaFAN_r2.3ch00196990 Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
FanaFAN_r2.3ch00200910 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
FanaFAN_r2.3ch00203460 Terpenoid CYP76 medium borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
FanaFAN_r2.3ch00204360 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
FanaFAN_r2.3ch00205700 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
FanaFAN_r2.3ch00205710 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
FanaFAN_r2.3ch00205720 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
FanaFAN_r2.3ch00207790 Terpenoid CYP76 low borderline CYP76__00017__sp_Q14T82_C76B9_PETHY
FanaFAN_r2.3ch00208260 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
FanaFAN_r2.3ch00211630 Terpenoid CYP76 low borderline CYP76__00017__sp_Q14T82_C76B9_PETHY
FanaFAN_r2.3ch00211990 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
FanaFAN_r2.3ch00212400 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
FanaFAN_r2.3ch00214660 Terpenoid CYP76 medium borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
FanaFAN_r2.3ch00216710 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
FanaFAN_r2.3ch00241480 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
FanaFAN_r2.3ch00245530 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
FanaFAN_r2.3ch00259740 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
FanaFAN_r2.3ch00259990 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO