PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

9107
Candidate Protein Records
6888
Pathway-Level Records
18621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Protein/Isoform Record Pathway Family Confidence Status
FanaFAN_r2.3ch4X2b1031290 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch5Ava1040770 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch5Avb1085890 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch5Avb1089250 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch5Avb1097580 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch5Bia1125660 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch5Bia1135290 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch5Bib1152630 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch5Bib1162800 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch5Bib1170250 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch5X1a1179610 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch5X1a1190790 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch5X2a1227990 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch5X2a1230920 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch5X2b1240480 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch5X2b1240890 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6Av1a1258770 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6Av1b1274990 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6Av2a1278290 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch6Av2a1285670 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6Av2a1294380 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6Av2b1297090 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch6Av2b1298540 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6Av2b1298570 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6Av2b1305090 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6Bia1327290 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6Bia1340730 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch6Bia1341040 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6Bib1365580 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6Bib1378780 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch6X1a1405290 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch6X1a1406340 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6X1a1406350 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6X1a1408010 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6X1a1411840 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6X1b1432330 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch6X1b1433430 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6X1b1433440 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6X1b1435050 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6X1b1439080 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6X3a1471120 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch6X3b1479880 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch7Ava1486850 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch7Ava1492120 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch7Ava1495080 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch7Ava1503120 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch7Ava1503140 Steroid CYP90D1 low borderline
FanaFAN_r2.3ch7Ava1504110 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch7Ava1505700 Steroid CYP90D1 medium borderline
FanaFAN_r2.3ch7Ava1506100 Steroid CYP90D1 low borderline