PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

9107
Candidate Protein Records
6888
Pathway-Level Records
18621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Protein/Isoform Record Pathway Family Confidence Status
FanaFAN_r2.3ch6Av1a1259230 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Av1a1259240 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Av1b1269330 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Av1b1275450 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Av2a1282930 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Av2a1285290 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Av2b1302220 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Av2b1304630 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Bia1326840 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Bia1335510 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Bia1338170 Flavonoid F3H low borderline
FanaFAN_r2.3ch6Bia1338200 Flavonoid F3H low borderline
FanaFAN_r2.3ch6Bia1338240 Flavonoid F3H low borderline
FanaFAN_r2.3ch6Bia1338260 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Bia1343630 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Bib1361470 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Bib1365080 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Bib1373760 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Bib1376240 Flavonoid F3H low borderline
FanaFAN_r2.3ch6Bib1376250 Flavonoid F3H low borderline
FanaFAN_r2.3ch6Bib1376290 Flavonoid F3H low borderline
FanaFAN_r2.3ch6Bib1376320 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6Bib1381040 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X1a1391340 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X1a1400590 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X1a1403140 Flavonoid F3H low borderline
FanaFAN_r2.3ch6X1a1403150 Flavonoid F3H low borderline
FanaFAN_r2.3ch6X1a1403160 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X1a1409330 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X1a1411540 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X1b1427710 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X1b1428000 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X1b1430240 Flavonoid F3H low borderline
FanaFAN_r2.3ch6X1b1430270 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X1b1436470 Flavonoid F3H low borderline
FanaFAN_r2.3ch6X1b1438760 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X2a1454400 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X2a1456030 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X2b1464330 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X2b1464360 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X3a1468720 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X3a1470610 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X3b1477470 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X3b1479450 Flavonoid F3H medium borderline
FanaFAN_r2.3ch6X3b1483470 Flavonoid F3H low borderline
FanaFAN_r2.3ch7Ava1489810 Flavonoid F3H medium borderline
FanaFAN_r2.3ch7Ava1495110 Flavonoid F3H medium borderline
FanaFAN_r2.3ch7Ava1495130 Flavonoid F3H medium pass
FanaFAN_r2.3ch7Ava1496340 Flavonoid F3H low borderline
FanaFAN_r2.3ch7Ava1499340 Flavonoid F3H medium borderline