PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch00205380 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
FanaFAN_r2.3ch00205390 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
FanaFAN_r2.3ch00205620 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
FanaFAN_r2.3ch00205630 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
FanaFAN_r2.3ch00208460 Phenylpropanoid POD low borderline POD__00006__sp_O22850_GPX3_ARATH
FanaFAN_r2.3ch00213100 Phenylpropanoid POD low borderline POD__00028__sp_Q9ZVD5_AGO4_ARATH
FanaFAN_r2.3ch00213660 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
FanaFAN_r2.3ch00222610 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
FanaFAN_r2.3ch00223440 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch00225740 Phenylpropanoid POD low borderline POD__00028__sp_Q9ZVD5_AGO4_ARATH
FanaFAN_r2.3ch00228190 Phenylpropanoid POD medium pass POD__00020__sp_Q9FE01_APX2_ORYSJ
FanaFAN_r2.3ch00233760 Phenylpropanoid POD medium pass POD__00020__sp_Q9FE01_APX2_ORYSJ
FanaFAN_r2.3ch00233950 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
FanaFAN_r2.3ch00234330 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
FanaFAN_r2.3ch00234820 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
FanaFAN_r2.3ch00235730 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
FanaFAN_r2.3ch00236300 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
FanaFAN_r2.3ch00238310 Phenylpropanoid POD low borderline POD__00007__sp_P0C5C9_REHYA_ORYSJ
FanaFAN_r2.3ch00242980 Phenylpropanoid POD medium pass POD__00026__sp_Q9XEX2_PRX2B_ARATH
FanaFAN_r2.3ch00247400 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
FanaFAN_r2.3ch00250330 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch00252720 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
FanaFAN_r2.3ch00254190 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
FanaFAN_r2.3ch00257800 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
FanaFAN_r2.3ch00273090 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch00273150 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch00273160 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch00273180 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch00274210 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
FanaFAN_r2.3ch00274260 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
FanaFAN_r2.3ch00274290 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
FanaFAN_r2.3ch00278010 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
FanaFAN_r2.3ch00278020 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
FanaFAN_r2.3ch00284020 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
FanaFAN_r2.3ch00290580 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
FanaFAN_r2.3ch00298310 Phenylpropanoid POD low borderline POD__00001__sp_A5H452_PER70_MAIZE
FanaFAN_r2.3ch00313230 Phenylpropanoid POD low borderline POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch00313570 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
FanaFAN_r2.3ch00314750 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
FanaFAN_r2.3ch00319740 Phenylpropanoid POD low borderline POD__00023__sp_Q9M7T0_PRX2F_ARATH
FanaFAN_r2.3ch00323950 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
FanaFAN_r2.3ch00323960 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
FanaFAN_r2.3ch00324730 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch00325300 Phenylpropanoid POD low borderline POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch00330610 Phenylpropanoid POD low borderline POD__00007__sp_P0C5C9_REHYA_ORYSJ
FanaFAN_r2.3ch00332220 Phenylpropanoid POD medium pass POD__00026__sp_Q9XEX2_PRX2B_ARATH
FanaFAN_r2.3ch00333710 Phenylpropanoid POD low borderline POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch00334440 Phenylpropanoid POD low borderline POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch00343800 Phenylpropanoid POD low borderline POD__00006__sp_O22850_GPX3_ARATH
FanaFAN_r2.3ch1Ava0345230 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA