PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch1X2a0468480 Phenylpropanoid POD low borderline POD__00003__sp_A9PCL4_PRX2_POPTR
FanaFAN_r2.3ch1X2a0471660 Phenylpropanoid POD medium pass POD__00016__sp_Q6QPJ6_PRXQ_POPJC
FanaFAN_r2.3ch1X2a0473450 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch1X2a0473700 Phenylpropanoid POD low borderline POD__00012__sp_Q10N21_APX1_ORYSJ
FanaFAN_r2.3ch1X2a0474660 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
FanaFAN_r2.3ch1X2b0478720 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch1X2b0479400 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
FanaFAN_r2.3ch1X2b0481040 Phenylpropanoid POD low borderline POD__00003__sp_A9PCL4_PRX2_POPTR
FanaFAN_r2.3ch1X2b0484090 Phenylpropanoid POD medium pass POD__00016__sp_Q6QPJ6_PRXQ_POPJC
FanaFAN_r2.3ch1X2b0485650 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
FanaFAN_r2.3ch1X2b0485850 Phenylpropanoid POD low borderline POD__00012__sp_Q10N21_APX1_ORYSJ
FanaFAN_r2.3ch1X2b0486740 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
FanaFAN_r2.3ch1X3a0490230 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch1X3a0490860 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
FanaFAN_r2.3ch1X3a0492510 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
FanaFAN_r2.3ch1X3b0494940 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch1X3b0495660 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
FanaFAN_r2.3ch1X3b0497230 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
FanaFAN_r2.3ch2Ava0499410 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
FanaFAN_r2.3ch2Ava0500450 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch2Ava0500910 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch2Ava0504790 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
FanaFAN_r2.3ch2Ava0507830 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
FanaFAN_r2.3ch2Ava0509800 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
FanaFAN_r2.3ch2Ava0511310 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
FanaFAN_r2.3ch2Ava0512790 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch2Ava0515500 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch2Ava0515550 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch2Ava0515950 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch2Ava0520540 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch2Ava0524990 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
FanaFAN_r2.3ch2Ava0525020 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
FanaFAN_r2.3ch2Ava0528990 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch2Ava0530940 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch2Ava0532690 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
FanaFAN_r2.3ch2Ava0532800 Phenylpropanoid POD low borderline POD__00002__sp_A5H8G4_PER1_MAIZE
FanaFAN_r2.3ch2Avb0533930 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
FanaFAN_r2.3ch2Avb0534440 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch2Avb0535790 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch2Avb0539520 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
FanaFAN_r2.3ch2Avb0542800 Phenylpropanoid POD medium pass POD__00011__sp_Q05431_APX1_ARATH
FanaFAN_r2.3ch2Avb0543760 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
FanaFAN_r2.3ch2Avb0546650 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch2Avb0549400 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch2Avb0549450 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch2Avb0554150 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
FanaFAN_r2.3ch2Avb0558770 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
FanaFAN_r2.3ch2Avb0558780 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
FanaFAN_r2.3ch2Avb0562980 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
FanaFAN_r2.3ch2Avb0564930 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH