PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch2Ava0501410 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
FanaFAN_r2.3ch2Ava0515090 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
FanaFAN_r2.3ch2Ava0523690 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
FanaFAN_r2.3ch2Avb0536190 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
FanaFAN_r2.3ch2Avb0536200 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
FanaFAN_r2.3ch2Avb0549900 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
FanaFAN_r2.3ch2Avb0557430 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
FanaFAN_r2.3ch2Bia0578910 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
FanaFAN_r2.3ch2Bib0602120 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
FanaFAN_r2.3ch2X1a0612500 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
FanaFAN_r2.3ch2X1a0612520 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
FanaFAN_r2.3ch2X1a0612530 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
FanaFAN_r2.3ch2X1a0612540 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
FanaFAN_r2.3ch2X1a0613280 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
FanaFAN_r2.3ch2X1a0623170 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
FanaFAN_r2.3ch2X1b0640460 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
FanaFAN_r2.3ch2X1b0640470 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
FanaFAN_r2.3ch2X1b0640480 Terpenoid TPS low borderline TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
FanaFAN_r2.3ch2X1b0640490 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
FanaFAN_r2.3ch2X1b0641080 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
FanaFAN_r2.3ch2X1b0649910 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
FanaFAN_r2.3ch3Ava0686240 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
FanaFAN_r2.3ch3Ava0686300 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
FanaFAN_r2.3ch3Ava0695190 Terpenoid TPS medium pass TPS__00029__sp_A0A1W6QDJ1_CPS4_ISORU
FanaFAN_r2.3ch3Ava0695210 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
FanaFAN_r2.3ch3Ava0695220 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
FanaFAN_r2.3ch3Ava0695250 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
FanaFAN_r2.3ch3Ava0696870 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
FanaFAN_r2.3ch3Ava0701440 Terpenoid TPS low borderline TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA
FanaFAN_r2.3ch3Ava0701610 Terpenoid TPS medium pass TPS__00018__sp_A0A1V0QSF3_TS8FN_CANSA
FanaFAN_r2.3ch3Ava0702290 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch3Avb0716030 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch3Avb0725940 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
FanaFAN_r2.3ch3Avb0725960 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
FanaFAN_r2.3ch3Avb0727660 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
FanaFAN_r2.3ch3Avb0732010 Terpenoid TPS low borderline TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA
FanaFAN_r2.3ch3Avb0732870 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch3Avb0732880 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch3Bia0749700 Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
FanaFAN_r2.3ch3Bib0762340 Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
FanaFAN_r2.3ch3X1a0773360 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
FanaFAN_r2.3ch3X1a0773410 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
FanaFAN_r2.3ch3X1a0773430 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
FanaFAN_r2.3ch3X1a0787670 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
FanaFAN_r2.3ch3X1a0787680 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
FanaFAN_r2.3ch3X1a0787710 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
FanaFAN_r2.3ch3X1a0787740 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
FanaFAN_r2.3ch3X1a0792330 Terpenoid TPS medium pass TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA
FanaFAN_r2.3ch3X1a0792360 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
FanaFAN_r2.3ch3X1a0792570 Terpenoid TPS medium pass TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA