PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch4X2b1030520 Terpenoid TPS medium pass TPS__00123__sp_I6R4V5_TPS2_MATCR
FanaFAN_r2.3ch4X2b1030530 Terpenoid TPS low borderline TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch4X2b1030540 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch5Ava1043990 Terpenoid TPS low borderline TPS__00042__sp_A0A348AUV9_TPS1E_CAMHI
FanaFAN_r2.3ch5Ava1044010 Terpenoid TPS medium pass TPS__00118__sp_G8H5N0_TPS17_SOLHA
FanaFAN_r2.3ch5Ava1044020 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch5Ava1044030 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
FanaFAN_r2.3ch5Ava1077540 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch5Avb1089210 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch5Avb1089220 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
FanaFAN_r2.3ch5Avb1121280 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch5Bia1128630 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
FanaFAN_r2.3ch5Bia1148540 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
FanaFAN_r2.3ch5Bib1155870 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
FanaFAN_r2.3ch5X1a1179570 Terpenoid TPS medium pass TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA
FanaFAN_r2.3ch5X1a1197900 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch5X1b1203920 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
FanaFAN_r2.3ch5X1b1222660 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch5X2a1230880 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
FanaFAN_r2.3ch5X2a1230890 Terpenoid TPS medium pass TPS__00136__sp_J9R5V4_TPS2_VALOF
FanaFAN_r2.3ch5X2a1230910 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
FanaFAN_r2.3ch5X2b1240430 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
FanaFAN_r2.3ch5X2b1240440 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
FanaFAN_r2.3ch6Av1a1249330 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
FanaFAN_r2.3ch6Av1a1253660 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch6Av1b1264970 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
FanaFAN_r2.3ch6Av1b1269410 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch6Av2a1286440 Terpenoid TPS low borderline TPS__00110__sp_G0Y7D1_TPS1_LITCU
FanaFAN_r2.3ch6Av2a1286450 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
FanaFAN_r2.3ch6Av2a1286460 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
FanaFAN_r2.3ch6Av2a1286530 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
FanaFAN_r2.3ch6Av2a1286540 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
FanaFAN_r2.3ch6Av2a1286550 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
FanaFAN_r2.3ch6Av2a1287950 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
FanaFAN_r2.3ch6Av2b1305840 Terpenoid TPS low borderline TPS__00110__sp_G0Y7D1_TPS1_LITCU
FanaFAN_r2.3ch6Av2b1305850 Terpenoid TPS medium pass TPS__00148__sp_O64961_TPS9_SOLLC
FanaFAN_r2.3ch6Av2b1305860 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
FanaFAN_r2.3ch6Av2b1305930 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
FanaFAN_r2.3ch6Av2b1305950 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
FanaFAN_r2.3ch6Av2b1305960 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
FanaFAN_r2.3ch6Av2b1306480 Terpenoid TPS medium pass TPS__00126__sp_J7LH11_TPS8_PHYDL
FanaFAN_r2.3ch6Av2b1306490 Terpenoid TPS medium pass TPS__00125__sp_I6RE61_TPS4_MATCR
FanaFAN_r2.3ch6Av2b1307490 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
FanaFAN_r2.3ch6Bia1319050 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
FanaFAN_r2.3ch6Bia1322920 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch6Bia1336830 Terpenoid TPS low borderline TPS__00029__sp_A0A1W6QDJ1_CPS4_ISORU
FanaFAN_r2.3ch6Bia1350660 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch6Bib1357510 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
FanaFAN_r2.3ch6Bib1361540 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
FanaFAN_r2.3ch6Bib1374970 Terpenoid TPS low borderline TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF