PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

9107
Candidate Protein Records
6888
Pathway-Level Records
18621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Protein/Isoform Record Pathway Family Confidence Status
FanaFAN_r2.3ch6X1b1422350 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch6X1b1428590 Alkaloid TRI/TRII low borderline
FanaFAN_r2.3ch6X2a1449760 Alkaloid TRI/TRII low borderline
FanaFAN_r2.3ch6X2a1451200 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch6X2a1453380 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch6X2a1455930 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch6X2a1455940 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch6X2a1455980 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch6X2a1455990 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch6X2b1460270 Alkaloid TRI/TRII low borderline
FanaFAN_r2.3ch6X2b1460280 Alkaloid TRI/TRII low borderline
FanaFAN_r2.3ch6X2b1461600 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch6X2b1463600 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch6X2b1465620 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch6X2b1465630 Alkaloid TRI/TRII low borderline
FanaFAN_r2.3ch6X2b1465640 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7Ava1485950 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7Ava1488630 Alkaloid TRI/TRII low borderline
FanaFAN_r2.3ch7Ava1503520 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7Avb1515330 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7Avb1518020 Alkaloid TRI/TRII low borderline
FanaFAN_r2.3ch7Avb1532920 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7Bia1545170 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7Bia1548140 Alkaloid TRI/TRII low borderline
FanaFAN_r2.3ch7Bia1558160 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7Bib1565050 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7Bib1565790 Alkaloid TRI/TRII low borderline
FanaFAN_r2.3ch7Bib1578490 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7X1a1584020 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7X1a1586520 Alkaloid TRI/TRII low borderline
FanaFAN_r2.3ch7X1a1600210 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7X1b1609500 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7X1b1611970 Alkaloid TRI/TRII low borderline
FanaFAN_r2.3ch7X1b1625550 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7X2a1634220 Alkaloid TRI/TRII low borderline
FanaFAN_r2.3ch7X2b1657810 Alkaloid TRI/TRII medium pass
FanaFAN_r2.3ch7X2b1659630 Alkaloid TRI/TRII low borderline