PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

9107
Candidate Protein Records
6888
Pathway-Level Records
18621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch7X2a1655780 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch7X2b1677140 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
FanaFAN_r2.3ch00006940 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch00032900 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch00045720 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch00055840 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch00107040 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
FanaFAN_r2.3ch00132140 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
FanaFAN_r2.3ch1Ava0362020 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch1Avb0383720 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch1X2a0476260 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch1X2b0488040 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch2Bib0595540 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch2X1a0618820 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch2X1b0646340 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch3Ava0697660 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
FanaFAN_r2.3ch3Ava0702170 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch3Avb0728500 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
FanaFAN_r2.3ch3X1a0789630 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
FanaFAN_r2.3ch3X1b0829140 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
FanaFAN_r2.3ch3X2a0852530 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
FanaFAN_r2.3ch3X2a0860120 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
FanaFAN_r2.3ch3X2b0876220 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
FanaFAN_r2.3ch3X2b0883900 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
FanaFAN_r2.3ch4Ava0906470 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch4Avb0929320 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
FanaFAN_r2.3ch3Ava0687980 Terpenoid GPPS medium borderline GPPS__00001__sp_Q5HZ00_SPS3_ARATH
FanaFAN_r2.3ch3Avb0718440 Terpenoid GPPS medium borderline GPPS__00001__sp_Q5HZ00_SPS3_ARATH
FanaFAN_r2.3ch3X1a0774880 Terpenoid GPPS medium borderline GPPS__00001__sp_Q5HZ00_SPS3_ARATH
FanaFAN_r2.3ch00078510 Terpenoid HDR/IspH high pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH
FanaFAN_r2.3ch2Ava0503210 Terpenoid HDR/IspH high pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH
FanaFAN_r2.3ch2Ava0513590 Terpenoid HDR/IspH high pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH
FanaFAN_r2.3ch2Avb0537300 Terpenoid HDR/IspH high pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH
FanaFAN_r2.3ch2Avb0547890 Terpenoid HDR/IspH high pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH
FanaFAN_r2.3ch2X1b0651910 Terpenoid HDR/IspH high pass HDR_IspH__00001__sp_Q94B35_ISPH_ARATH
FanaFAN_r2.3ch00149910 Terpenoid HDS/IspG high pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
FanaFAN_r2.3ch00158250 Terpenoid HDS/IspG high pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
FanaFAN_r2.3ch3Ava0711190 Terpenoid HDS/IspG high pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
FanaFAN_r2.3ch3Avb0741860 Terpenoid HDS/IspG high pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
FanaFAN_r2.3ch3Bia0749980 Terpenoid HDS/IspG high pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
FanaFAN_r2.3ch3Bib0762540 Terpenoid HDS/IspG high pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
FanaFAN_r2.3ch3X1a0800200 Terpenoid HDS/IspG high pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
FanaFAN_r2.3ch00030620 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
FanaFAN_r2.3ch00038540 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
FanaFAN_r2.3ch00045000 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
FanaFAN_r2.3ch00062120 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
FanaFAN_r2.3ch00065340 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
FanaFAN_r2.3ch00065350 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
FanaFAN_r2.3ch00065380 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
FanaFAN_r2.3ch1X1a0430900 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI