PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch00229020 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
FanaFAN_r2.3ch00229480 Terpenoid BAHD medium pass BAHD__00022__sp_K7PEY4_RAM2_MEDTR
FanaFAN_r2.3ch00229630 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
FanaFAN_r2.3ch00230680 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
FanaFAN_r2.3ch00235250 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
FanaFAN_r2.3ch00235590 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
FanaFAN_r2.3ch00236130 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00238410 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
FanaFAN_r2.3ch00239060 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00239470 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
FanaFAN_r2.3ch00241710 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
FanaFAN_r2.3ch00242440 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
FanaFAN_r2.3ch00245190 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00250090 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
FanaFAN_r2.3ch00250470 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
FanaFAN_r2.3ch00253110 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
FanaFAN_r2.3ch00255570 Terpenoid BAHD medium pass BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH
FanaFAN_r2.3ch00255870 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
FanaFAN_r2.3ch00261640 Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
FanaFAN_r2.3ch00262530 Terpenoid BAHD low borderline BAHD__00074__sp_Q9FFQ7_FACT_ARATH
FanaFAN_r2.3ch00262760 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
FanaFAN_r2.3ch00263170 Terpenoid BAHD low borderline BAHD__00074__sp_Q9FFQ7_FACT_ARATH
FanaFAN_r2.3ch00264990 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
FanaFAN_r2.3ch00265860 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00265950 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00267030 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
FanaFAN_r2.3ch00267500 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00267900 Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
FanaFAN_r2.3ch00268770 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
FanaFAN_r2.3ch00273510 Terpenoid BAHD low borderline BAHD__00097__sp_Q9ZV87_NAPES_ARATH
FanaFAN_r2.3ch00276420 Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
FanaFAN_r2.3ch00276600 Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
FanaFAN_r2.3ch00277180 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
FanaFAN_r2.3ch00278590 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
FanaFAN_r2.3ch00278650 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00285370 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
FanaFAN_r2.3ch00290170 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
FanaFAN_r2.3ch00291130 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
FanaFAN_r2.3ch00291640 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
FanaFAN_r2.3ch00292770 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00295900 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
FanaFAN_r2.3ch00296040 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00296570 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
FanaFAN_r2.3ch00299570 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
FanaFAN_r2.3ch00299830 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00301980 Terpenoid BAHD medium pass BAHD__00031__sp_P0DO25_AT9_ACTDE
FanaFAN_r2.3ch00304360 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
FanaFAN_r2.3ch00305050 Terpenoid BAHD medium pass BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
FanaFAN_r2.3ch00306400 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00307480 Terpenoid BAHD medium pass BAHD__00031__sp_P0DO25_AT9_ACTDE