PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
Reset
Protein/Isoform Record Pathway Family Confidence Status
GtomD01G0006390.1 Alkaloid GS low borderline
GtomD01G0006390.2 Alkaloid GS low borderline
GtomD02G0020580.1 Alkaloid GS low borderline
GtomD02G0026030.1 Alkaloid GS medium pass
GtomD03G0003900.1 Alkaloid GS high pass
GtomD03G0003900.2 Alkaloid GS high pass
GtomD03G0003920.1 Alkaloid GS high pass
GtomD03G0003920.2 Alkaloid GS high pass
GtomD03G0005520.1 Alkaloid GS high pass
GtomD03G0016470.1 Alkaloid GS low borderline
GtomD04G0006540.1 Alkaloid GS low borderline
GtomD04G0011100.1 Alkaloid GS low borderline
GtomD04G0011100.2 Alkaloid GS low borderline
GtomD05G0018200.1 Alkaloid GS low borderline
GtomD05G0018210.1 Alkaloid GS low borderline
GtomD05G0020270.1 Alkaloid GS high pass
GtomD05G0030850.1 Alkaloid GS low borderline
GtomD06G0004260.1 Alkaloid GS low borderline
GtomD07G0005270.1 Alkaloid GS low borderline
GtomD07G0005280.1 Alkaloid GS low borderline
GtomD07G0010720.1 Alkaloid GS low borderline
GtomD07G0010730.1 Alkaloid GS low borderline
GtomD07G0010740.1 Alkaloid GS low borderline
GtomD07G0010750.1 Alkaloid GS low borderline
GtomD07G0010750.2 Alkaloid GS low borderline
GtomD07G0010760.1 Alkaloid GS low borderline
GtomD07G0024040.1 Alkaloid GS low borderline
GtomD07G0024050.1 Alkaloid GS low borderline
GtomD07G0024060.1 Alkaloid GS low borderline
GtomD07G0024080.1 Alkaloid GS low borderline
GtomD07G0026680.1 Alkaloid GS low borderline
GtomD07G0026710.1 Alkaloid GS low borderline
GtomD09G0003200.1 Alkaloid GS low borderline
GtomD09G0003200.2 Alkaloid GS low borderline
GtomD09G0003200.3 Alkaloid GS low borderline
GtomD09G0004890.1 Alkaloid GS medium pass
GtomD10G0002420.1 Alkaloid GS low borderline
GtomD10G0013180.1 Alkaloid GS medium pass
GtomD10G0014860.1 Alkaloid GS low borderline
GtomD11G0016320.1 Alkaloid GS low borderline
GtomD11G0022670.1 Alkaloid GS high pass
GtomD11G0022670.2 Alkaloid GS high pass
GtomD11G0024080.1 Alkaloid GS high pass
GtomD11G0024100.1 Alkaloid GS high pass
GtomD11G0024110.1 Alkaloid GS high pass
GtomD11G0034940.1 Alkaloid GS high pass
GtomD11G0036620.1 Alkaloid GS low borderline
GtomD12G0002420.1 Alkaloid GS high pass
GtomD12G0009950.1 Alkaloid GS high pass
GtomD12G0009960.1 Alkaloid GS high pass