PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Protein/Isoform Record Pathway Family Confidence Status
GtomD06G0020850.2 Steroid ROT3/CYP90C1 medium borderline
GtomD07G0009350.1 Steroid ROT3/CYP90C1 medium borderline
GtomD07G0009350.2 Steroid ROT3/CYP90C1 medium borderline
GtomD07G0009350.4 Steroid ROT3/CYP90C1 medium borderline
GtomD08G0020220.1 Steroid ROT3/CYP90C1 medium borderline
GtomD08G0020250.1 Steroid ROT3/CYP90C1 medium borderline
GtomD08G0020250.2 Steroid ROT3/CYP90C1 medium borderline
GtomD09G0002380.1 Steroid ROT3/CYP90C1 low borderline
GtomD09G0022920.1 Steroid ROT3/CYP90C1 low borderline
GtomD09G0022930.1 Steroid ROT3/CYP90C1 medium borderline
GtomD10G0000680.1 Steroid ROT3/CYP90C1 low borderline
GtomD10G0016990.1 Steroid ROT3/CYP90C1 medium borderline
GtomD11G0020630.1 Steroid ROT3/CYP90C1 medium borderline
GtomD12G0026790.1 Steroid ROT3/CYP90C1 medium borderline
GtomD13G0001370.1 Steroid ROT3/CYP90C1 medium borderline
GtomD13G0007400.1 Steroid ROT3/CYP90C1 medium borderline