PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomA01G0022500.1 Alkaloid 8HGO medium borderline
GtomA02G0008120.1 Alkaloid 8HGO medium borderline
GtomA02G0008160.1 Alkaloid 8HGO medium pass
GtomA02G0008170.1 Alkaloid 8HGO medium borderline
GtomA02G0015450.1 Alkaloid 8HGO medium borderline
GtomA02G0015450.2 Alkaloid 8HGO medium borderline
GtomA02G0015450.3 Alkaloid 8HGO medium borderline
GtomA02G0015450.4 Alkaloid 8HGO medium borderline
GtomA02G0015450.5 Alkaloid 8HGO medium borderline
GtomA04G0008450.1 Alkaloid 8HGO medium borderline
GtomA04G0008450.2 Alkaloid 8HGO medium borderline
GtomA06G0003990.1 Alkaloid 8HGO medium borderline
GtomA06G0004000.1 Alkaloid 8HGO medium borderline
GtomA07G0017790.1 Alkaloid 8HGO medium borderline
GtomA07G0023760.1 Alkaloid 8HGO medium borderline
GtomA08G0012720.1 Alkaloid 8HGO medium borderline
GtomA08G0026710.1 Alkaloid 8HGO medium borderline
GtomA08G0026710.2 Alkaloid 8HGO medium pass
GtomA10G0026050.1 Alkaloid 8HGO medium borderline
GtomA11G0006630.1 Alkaloid 8HGO medium borderline
GtomA11G0006640.1 Alkaloid 8HGO medium borderline
GtomD01G0012230.1 Alkaloid 8HGO medium borderline
GtomD01G0023330.1 Alkaloid 8HGO medium borderline
GtomD02G0009340.1 Alkaloid 8HGO medium borderline
GtomD02G0009360.1 Alkaloid 8HGO medium borderline
GtomD02G0009440.1 Alkaloid 8HGO medium borderline
GtomD02G0009460.1 Alkaloid 8HGO medium borderline
GtomD03G0006240.1 Alkaloid 8HGO medium borderline
GtomD06G0004250.1 Alkaloid 8HGO medium borderline
GtomD06G0010700.1 Alkaloid 8HGO medium borderline
GtomD07G0018180.1 Alkaloid 8HGO medium pass
GtomD07G0018190.1 Alkaloid 8HGO medium borderline
GtomD07G0024670.1 Alkaloid 8HGO medium borderline
GtomD08G0013730.1 Alkaloid 8HGO medium borderline
GtomD08G0028210.1 Alkaloid 8HGO medium borderline
GtomD08G0028210.2 Alkaloid 8HGO medium pass
GtomD10G0027840.1 Alkaloid 8HGO medium borderline
GtomD11G0006500.1 Alkaloid 8HGO medium borderline
GtomD11G0006500.2 Alkaloid 8HGO medium borderline
GtomD11G0006510.1 Alkaloid 8HGO medium borderline
GtomA02G0009600.1 Alkaloid ADC low borderline
GtomA03G0023590.1 Alkaloid ADC medium pass
GtomA04G0016400.1 Alkaloid ADC medium pass
GtomA06G0017750.1 Alkaloid ADC low borderline
GtomA06G0017750.2 Alkaloid ADC low borderline
GtomA06G0017750.3 Alkaloid ADC low borderline
GtomA06G0017750.4 Alkaloid ADC low borderline
GtomA11G0029230.1 Alkaloid ADC low borderline
GtomA13G0010440.1 Alkaloid ADC medium pass
GtomD02G0027440.1 Alkaloid ADC medium pass