PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomD04G0020290.1 Alkaloid ADC medium pass
GtomD06G0019870.1 Alkaloid ADC low borderline
GtomD06G0019870.2 Alkaloid ADC low borderline
GtomD06G0019870.3 Alkaloid ADC low borderline
GtomD13G0011390.1 Alkaloid ADC medium pass
GtomA02G0002090.1 Alkaloid BBE medium borderline
GtomA02G0002100.1 Alkaloid BBE medium borderline
GtomA02G0002110.1 Alkaloid BBE medium borderline
GtomA02G0002130.1 Alkaloid BBE medium borderline
GtomA02G0002150.1 Alkaloid BBE medium borderline
GtomA02G0002160.1 Alkaloid BBE medium borderline
GtomA02G0010310.1 Alkaloid BBE medium borderline
GtomA04G0017410.1 Alkaloid BBE medium borderline
GtomA04G0017420.1 Alkaloid BBE medium borderline
GtomA05G0012140.1 Alkaloid BBE medium borderline
GtomA06G0014010.1 Alkaloid BBE medium borderline
GtomA06G0021750.1 Alkaloid BBE medium borderline
GtomA06G0021760.1 Alkaloid BBE medium borderline
GtomA06G0021780.1 Alkaloid BBE medium borderline
GtomA07G0007160.1 Alkaloid BBE medium borderline
GtomA07G0007170.1 Alkaloid BBE medium borderline
GtomA09G0020880.1 Alkaloid BBE medium borderline
GtomA09G0020890.1 Alkaloid BBE medium borderline
GtomA09G0023800.1 Alkaloid BBE medium borderline
GtomA10G0000670.1 Alkaloid BBE medium borderline
GtomA10G0000680.1 Alkaloid BBE medium borderline
GtomA10G0000690.1 Alkaloid BBE medium borderline
GtomA10G0000700.1 Alkaloid BBE medium borderline
GtomA10G0000710.1 Alkaloid BBE medium borderline
GtomA10G0000720.1 Alkaloid BBE medium borderline
GtomA10G0000730.1 Alkaloid BBE medium borderline
GtomA10G0000740.1 Alkaloid BBE medium borderline
GtomA10G0000760.1 Alkaloid BBE medium borderline
GtomA10G0000770.1 Alkaloid BBE medium borderline
GtomA10G0000780.1 Alkaloid BBE medium borderline
GtomA10G0015500.1 Alkaloid BBE medium borderline
GtomA10G0017820.1 Alkaloid BBE medium borderline
GtomA10G0018570.1 Alkaloid BBE medium borderline
GtomA11G0001230.1 Alkaloid BBE medium borderline
GtomA11G0001240.1 Alkaloid BBE medium borderline
GtomA11G0001250.1 Alkaloid BBE medium borderline
GtomA11G0001260.1 Alkaloid BBE medium borderline
GtomA12G0029410.1 Alkaloid BBE medium borderline
GtomA12G0029420.1 Alkaloid BBE medium borderline
GtomA12G0029430.1 Alkaloid BBE medium borderline
GtomA12G0029440.1 Alkaloid BBE medium borderline
GtomA12G0029450.1 Alkaloid BBE medium borderline
GtomA13G0002180.1 Alkaloid BBE medium borderline
GtomD02G0002580.1 Alkaloid BBE medium borderline
GtomD02G0002590.1 Alkaloid BBE medium borderline