PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomA07G0016850.1 Rosmarinic Acid HPPR medium pass
GtomA09G0010000.1 Rosmarinic Acid HPPR medium pass
GtomA09G0010000.2 Rosmarinic Acid HPPR medium pass
GtomA12G0025550.1 Rosmarinic Acid HPPR medium pass
GtomD03G0019380.1 Rosmarinic Acid HPPR medium pass
GtomD03G0019390.1 Rosmarinic Acid HPPR medium pass
GtomD03G0019400.1 Rosmarinic Acid HPPR medium pass
GtomD05G0014110.1 Rosmarinic Acid HPPR medium pass
GtomD07G0017150.1 Rosmarinic Acid HPPR medium pass
GtomD07G0017150.2 Rosmarinic Acid HPPR medium pass
GtomD07G0017150.3 Rosmarinic Acid HPPR medium pass
GtomD09G0010160.1 Rosmarinic Acid HPPR medium pass
GtomD12G0026560.1 Rosmarinic Acid HPPR medium pass
GtomA01G0025250.1 Rosmarinic Acid PAL high pass
GtomA01G0025250.2 Rosmarinic Acid PAL high pass
GtomA04G0010410.1 Rosmarinic Acid PAL high pass
GtomA04G0010420.1 Rosmarinic Acid PAL high pass
GtomA06G0008940.1 Rosmarinic Acid PAL high pass
GtomA09G0017610.1 Rosmarinic Acid PAL high pass
GtomA10G0024510.1 Rosmarinic Acid PAL high pass
GtomA11G0039050.1 Rosmarinic Acid PAL high pass
GtomD01G0026140.1 Rosmarinic Acid PAL high pass
GtomD03G0017560.1 Rosmarinic Acid PAL low borderline
GtomD04G0014030.1 Rosmarinic Acid PAL high pass
GtomD04G0014040.1 Rosmarinic Acid PAL medium pass
GtomD04G0014060.1 Rosmarinic Acid PAL medium pass
GtomD06G0009400.1 Rosmarinic Acid PAL high pass
GtomD09G0017450.1 Rosmarinic Acid PAL high pass
GtomD10G0025920.1 Rosmarinic Acid PAL high pass
GtomD11G0040880.1 Rosmarinic Acid PAL high pass
GtomA01G0014810.1 Rosmarinic Acid RAS low borderline
GtomA01G0019970.1 Rosmarinic Acid RAS low borderline
GtomA02G0010870.1 Rosmarinic Acid RAS low borderline
GtomA02G0020710.1 Rosmarinic Acid RAS low borderline
GtomA03G0007380.1 Rosmarinic Acid RAS medium pass
GtomA03G0007380.2 Rosmarinic Acid RAS medium pass
GtomA03G0007380.3 Rosmarinic Acid RAS medium pass
GtomA05G0005770.1 Rosmarinic Acid RAS medium pass
GtomA05G0009940.1 Rosmarinic Acid RAS low borderline
GtomA05G0012700.1 Rosmarinic Acid RAS medium pass
GtomA05G0012700.2 Rosmarinic Acid RAS medium pass
GtomA05G0020030.1 Rosmarinic Acid RAS low borderline
GtomA05G0028040.1 Rosmarinic Acid RAS low borderline
GtomA05G0028040.2 Rosmarinic Acid RAS low borderline
GtomA05G0037230.1 Rosmarinic Acid RAS low borderline
GtomA06G0000310.1 Rosmarinic Acid RAS low borderline
GtomA06G0000860.1 Rosmarinic Acid RAS low borderline
GtomA06G0002250.1 Rosmarinic Acid RAS low borderline
GtomA06G0002260.1 Rosmarinic Acid RAS low borderline
GtomA06G0002270.1 Rosmarinic Acid RAS low borderline