PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomA13G0024460.2 Alkaloid H6H low borderline
GtomA13G0024480.1 Alkaloid H6H low borderline
GtomA13G0024490.1 Alkaloid H6H low borderline
GtomA13G0024510.1 Alkaloid H6H low borderline
GtomA13G0024530.1 Alkaloid H6H low borderline
GtomA13G0024540.1 Alkaloid H6H low borderline
GtomA13G0024550.1 Alkaloid H6H low borderline
GtomA13G0024560.1 Alkaloid H6H low borderline
GtomA13G0024570.1 Alkaloid H6H low borderline
GtomA13G0024600.1 Alkaloid H6H low borderline
GtomA13G0024610.1 Alkaloid H6H low borderline
GtomA13G0024620.1 Alkaloid H6H low borderline
GtomA13G0024660.1 Alkaloid H6H low borderline
GtomA13G0024690.1 Alkaloid H6H low borderline
GtomA13G0024700.1 Alkaloid H6H low borderline
GtomA13G0024710.1 Alkaloid H6H low borderline
GtomA13G0024730.1 Alkaloid H6H low borderline
GtomA13G0024760.1 Alkaloid H6H low borderline
GtomA13G0025460.1 Alkaloid H6H medium pass
GtomD01G0000380.1 Alkaloid H6H medium borderline
GtomD01G0000670.1 Alkaloid H6H medium borderline
GtomD01G0016410.1 Alkaloid H6H medium borderline
GtomD01G0026260.1 Alkaloid H6H low borderline
GtomD03G0002850.1 Alkaloid H6H low borderline
GtomD03G0006700.1 Alkaloid H6H low borderline
GtomD03G0006700.2 Alkaloid H6H low borderline
GtomD03G0007210.1 Alkaloid H6H low borderline
GtomD03G0007260.1 Alkaloid H6H low borderline
GtomD03G0007820.1 Alkaloid H6H medium borderline
GtomD04G0002790.1 Alkaloid H6H medium borderline
GtomD04G0013430.1 Alkaloid H6H medium borderline
GtomD05G0001190.1 Alkaloid H6H low borderline
GtomD05G0014470.1 Alkaloid H6H low borderline
GtomD05G0019220.1 Alkaloid H6H medium borderline
GtomD05G0026270.1 Alkaloid H6H medium pass
GtomD05G0042010.1 Alkaloid H6H low borderline
GtomD05G0042010.2 Alkaloid H6H low borderline
GtomD05G0042020.1 Alkaloid H6H low borderline
GtomD05G0042040.1 Alkaloid H6H low borderline
GtomD05G0042050.1 Alkaloid H6H low borderline
GtomD06G0018090.1 Alkaloid H6H low borderline
GtomD06G0018090.2 Alkaloid H6H low borderline
GtomD07G0009970.1 Alkaloid H6H medium borderline
GtomD07G0009980.1 Alkaloid H6H medium borderline
GtomD07G0015120.1 Alkaloid H6H low borderline
GtomD07G0022230.1 Alkaloid H6H low borderline
GtomD07G0022740.1 Alkaloid H6H medium borderline
GtomD07G0025680.1 Alkaloid H6H medium borderline
GtomD07G0025690.1 Alkaloid H6H medium pass
GtomD07G0025690.2 Alkaloid H6H medium borderline