PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomA02G0007860.1 Rosmarinic Acid C4H low borderline
GtomA02G0007860.2 Rosmarinic Acid C4H low borderline
GtomA02G0010150.1 Rosmarinic Acid C4H medium pass
GtomA02G0010190.1 Rosmarinic Acid C4H low borderline
GtomA02G0011940.1 Rosmarinic Acid C4H low borderline
GtomA02G0014100.1 Rosmarinic Acid C4H low borderline
GtomA02G0016420.1 Rosmarinic Acid C4H low borderline
GtomA02G0017000.1 Rosmarinic Acid C4H low borderline
GtomA02G0018700.1 Rosmarinic Acid C4H low borderline
GtomA02G0019000.1 Rosmarinic Acid C4H low borderline
GtomA02G0019010.1 Rosmarinic Acid C4H medium pass
GtomA02G0019020.1 Rosmarinic Acid C4H low borderline
GtomA02G0020300.1 Rosmarinic Acid C4H low borderline
GtomA02G0020300.2 Rosmarinic Acid C4H low borderline
GtomA03G0002160.1 Rosmarinic Acid C4H low borderline
GtomA03G0002170.1 Rosmarinic Acid C4H medium pass
GtomA03G0002180.1 Rosmarinic Acid C4H low borderline
GtomA03G0002190.1 Rosmarinic Acid C4H low borderline
GtomA03G0006040.1 Rosmarinic Acid C4H low borderline
GtomA03G0006580.1 Rosmarinic Acid C4H low borderline
GtomA03G0009700.1 Rosmarinic Acid C4H low borderline
GtomA03G0009710.1 Rosmarinic Acid C4H low borderline
GtomA03G0009740.1 Rosmarinic Acid C4H low borderline
GtomA03G0009750.1 Rosmarinic Acid C4H low borderline
GtomA03G0016030.1 Rosmarinic Acid C4H medium pass
GtomA04G0002480.1 Rosmarinic Acid C4H low borderline
GtomA04G0002490.1 Rosmarinic Acid C4H low borderline
GtomA04G0002520.1 Rosmarinic Acid C4H low borderline
GtomA04G0006910.1 Rosmarinic Acid C4H medium pass
GtomA04G0006920.1 Rosmarinic Acid C4H medium pass
GtomA04G0006940.1 Rosmarinic Acid C4H medium pass
GtomA04G0009690.1 Rosmarinic Acid C4H low borderline
GtomA04G0009710.1 Rosmarinic Acid C4H low borderline
GtomA04G0017280.1 Rosmarinic Acid C4H low borderline
GtomA04G0017290.1 Rosmarinic Acid C4H low borderline
GtomA04G0018280.1 Rosmarinic Acid C4H medium pass
GtomA04G0018950.1 Rosmarinic Acid C4H low borderline
GtomA04G0018960.1 Rosmarinic Acid C4H low borderline
GtomA05G0002140.1 Rosmarinic Acid C4H low borderline
GtomA05G0003640.1 Rosmarinic Acid C4H low borderline
GtomA05G0004540.1 Rosmarinic Acid C4H low borderline
GtomA05G0004540.2 Rosmarinic Acid C4H low borderline
GtomA05G0006890.1 Rosmarinic Acid C4H low borderline
GtomA05G0007370.1 Rosmarinic Acid C4H low borderline
GtomA05G0008910.1 Rosmarinic Acid C4H low borderline
GtomA05G0011790.1 Rosmarinic Acid C4H low borderline
GtomA05G0014480.1 Rosmarinic Acid C4H low borderline
GtomA05G0014480.2 Rosmarinic Acid C4H low borderline
GtomA05G0016090.1 Rosmarinic Acid C4H low borderline
GtomA05G0016100.1 Rosmarinic Acid C4H low borderline