PlantSME Plant secondary metabolism enzyme database

Leavenworthia alabamica (leavenworthia_alabamica)

Imported from atlas release summary for Leavenworthia alabamica.

1376
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 19 BAHD (155) View species results
Alkaloid pathway 331 22 NMT (92) View species results
Phenylpropanoid pathway 319 11 POD (162) View species results
Flavonoid pathway 152 9 UFGT (94) View species results
Rosmarinic acid pathway 100 7 C4H (36) View species results
Steroid pathway 92 12 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1198 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 254 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
LalaLA_scaffold7850354530 Alkaloid 7DLGT low borderline
LalaLA_scaffold8450362420 Alkaloid 7DLGT medium pass
LalaLA_scaffold8630365640 Alkaloid 7DLGT medium pass
LalaLA_scaffold8670366590 Alkaloid 7DLGT low borderline
LalaLA_scaffold8960372160 Alkaloid 7DLGT low borderline
LalaLA_scaffold9110374430 Alkaloid 7DLGT low borderline
LalaLA_scaffold9130374850 Alkaloid 7DLGT high pass
LalaLA_scaffold9130374860 Alkaloid 7DLGT medium pass
LalaLA_scaffold9410378550 Alkaloid 7DLGT low borderline
LalaLA_scaffold9830384470 Alkaloid 7DLGT low borderline
LalaLA_scaffold9890385180 Alkaloid 7DLGT low borderline
LalaLA_C549090038110 Alkaloid 7DLH medium borderline
LalaLA_C707210054280 Alkaloid 7DLH low borderline
LalaLA_scaffold10080061090 Alkaloid 7DLH medium borderline
LalaLA_scaffold10080061120 Alkaloid 7DLH medium borderline
LalaLA_scaffold10080061130 Alkaloid 7DLH medium borderline
LalaLA_scaffold12420091720 Alkaloid 7DLH medium borderline
LalaLA_scaffold13820108170 Alkaloid 7DLH medium borderline
LalaLA_scaffold13820108190 Alkaloid 7DLH medium borderline
LalaLA_scaffold14330112970 Alkaloid 7DLH medium borderline
LalaLA_scaffold14890119730 Alkaloid 7DLH medium borderline
LalaLA_scaffold17550154610 Alkaloid 7DLH medium borderline
LalaLA_scaffold18120161290 Alkaloid 7DLH medium borderline
LalaLA_scaffold22680203260 Alkaloid 7DLH medium borderline
LalaLA_scaffold33170275640 Alkaloid 7DLH low borderline
LalaLA_scaffold34830285420 Alkaloid 7DLH medium borderline
LalaLA_scaffold4020300450 Alkaloid 7DLH medium borderline
LalaLA_scaffold5750323890 Alkaloid 7DLH medium borderline
LalaLA_scaffold7570352600 Alkaloid 7DLH low borderline
LalaLA_scaffold7920355030 Alkaloid 7DLH medium borderline
LalaLA_C532330036560 Alkaloid 8HGO medium pass
LalaLA_scaffold10220063030 Alkaloid 8HGO medium borderline
LalaLA_scaffold12320090360 Alkaloid 8HGO medium borderline
LalaLA_scaffold13650106180 Alkaloid 8HGO medium borderline
LalaLA_scaffold14210111490 Alkaloid 8HGO low borderline
LalaLA_scaffold16560142650 Alkaloid 8HGO medium borderline
LalaLA_scaffold2480220520 Alkaloid 8HGO low borderline
LalaLA_scaffold25050221900 Alkaloid 8HGO medium borderline
LalaLA_scaffold5100315180 Alkaloid 8HGO medium borderline
LalaLA_scaffold5800324590 Alkaloid 8HGO medium pass
LalaLA_scaffold7160346250 Alkaloid 8HGO medium borderline
LalaLA_scaffold930376400 Alkaloid 8HGO medium borderline
LalaLA_scaffold11750083660 Alkaloid ADC medium pass
LalaLA_scaffold15380128210 Alkaloid ADC medium pass
LalaLA_scaffold8950371960 Alkaloid ADC medium pass
LalaLA_C569870039750 Alkaloid BBE medium borderline
LalaLA_C685810051100 Alkaloid BBE medium borderline
LalaLA_C728170057160 Alkaloid BBE medium borderline
LalaLA_scaffold10620067620 Alkaloid BBE medium borderline
LalaLA_scaffold10620067630 Alkaloid BBE medium borderline