PlantSME Plant secondary metabolism enzyme database

Leavenworthia alabamica (leavenworthia_alabamica)

Imported from atlas release summary for Leavenworthia alabamica.

1376
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 19 BAHD (155) View species results
Alkaloid pathway 331 22 NMT (92) View species results
Phenylpropanoid pathway 319 11 POD (162) View species results
Flavonoid pathway 152 9 UFGT (94) View species results
Rosmarinic acid pathway 100 7 C4H (36) View species results
Steroid pathway 92 12 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1198 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 254 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
LalaLA_scaffold11140072730 Alkaloid BBE low borderline
LalaLA_scaffold11140072750 Alkaloid BBE medium borderline
LalaLA_scaffold13090100180 Alkaloid BBE medium borderline
LalaLA_scaffold13360103600 Alkaloid BBE low borderline
LalaLA_scaffold15750134050 Alkaloid BBE medium borderline
LalaLA_scaffold16360141540 Alkaloid BBE medium borderline
LalaLA_scaffold16360141550 Alkaloid BBE medium borderline
LalaLA_scaffold17730156130 Alkaloid BBE medium borderline
LalaLA_scaffold17830158210 Alkaloid BBE low borderline
LalaLA_scaffold17830158220 Alkaloid BBE medium borderline
LalaLA_scaffold20720184760 Alkaloid BBE medium borderline
LalaLA_scaffold20720184770 Alkaloid BBE medium borderline
LalaLA_scaffold20720184780 Alkaloid BBE medium borderline
LalaLA_scaffold20720184790 Alkaloid BBE medium borderline
LalaLA_scaffold2120189980 Alkaloid BBE medium borderline
LalaLA_scaffold28330245820 Alkaloid BBE medium borderline
LalaLA_scaffold28330245830 Alkaloid BBE medium borderline
LalaLA_scaffold31440265330 Alkaloid BBE low borderline
LalaLA_scaffold4980313160 Alkaloid BBE medium borderline
LalaLA_scaffold5710321970 Alkaloid BBE low borderline
LalaLA_scaffold7570352860 Alkaloid BBE medium borderline
LalaLA_scaffold8800369160 Alkaloid BBE medium borderline
LalaLA_scaffold8800369180 Alkaloid BBE medium borderline
LalaLA_scaffold9890384880 Alkaloid BBE medium borderline
LalaLA_scaffold15500130970 Alkaloid CNMT medium borderline
LalaLA_scaffold17550154580 Alkaloid CNMT low borderline
LalaLA_scaffold24300217300 Alkaloid CNMT low borderline
LalaLA_scaffold2520222620 Alkaloid CNMT low borderline
LalaLA_scaffold30130257020 Alkaloid CNMT medium borderline
LalaLA_scaffold6930342170 Alkaloid CNMT low borderline
LalaLA_scaffold9660382660 Alkaloid CNMT low borderline
LalaLA_C583750041080 Alkaloid CODM/T6ODM medium borderline
LalaLA_C609390043340 Alkaloid CODM/T6ODM medium borderline
LalaLA_C650850047230 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold10080061550 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold10170062180 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold10190062780 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold10300063710 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold1070068230 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold11270074980 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold1140077110 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold11480079730 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold11700082740 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold12010085830 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold12360090600 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold13080099300 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold13640106100 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold15270125870 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold15900136050 Alkaloid CODM/T6ODM medium borderline
LalaLA_scaffold16940146730 Alkaloid CODM/T6ODM medium borderline