PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

2086
Candidate Protein Records
1740
Pathway-Level Records
4443
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
KN539476.1_FGP006 Alkaloid IO medium borderline
KN539689.1_FGP002 Alkaloid IO low borderline
KN539776.1_FGP001 Alkaloid IO medium borderline
KN539938.1_FGP005 Alkaloid IO low borderline
KN540042.1_FGP002 Alkaloid IO medium borderline
KN540079.1_FGP001 Alkaloid IO low borderline
KN540087.1_FGP006 Alkaloid IO medium borderline
KN540802.1_FGP003 Alkaloid IO medium borderline
KN540875.1_FGP002 Alkaloid IO medium borderline
KN541397.1_FGP001 Alkaloid IO medium borderline
KN541466.1_FGP001 Alkaloid IO medium borderline
KN541895.1_FGP003 Alkaloid IO low borderline
KN542345.1_FGP001 Alkaloid IO medium borderline
KN545327.1_FGP001 Alkaloid IO low borderline
KN538895.1_FGP027 Alkaloid ISY medium pass
KN540471.1_FGP002 Alkaloid ISY medium pass
KN541445.1_FGP003 Alkaloid ISY medium pass
AMDW01040785.1_FGP001 Alkaloid LAMT medium borderline
KN538740.1_FGP061 Alkaloid LAMT medium borderline
KN538964.1_FGP001 Alkaloid LAMT medium borderline
KN538964.1_FGP002 Alkaloid LAMT medium borderline
KN538964.1_FGP004 Alkaloid LAMT medium borderline
KN538964.1_FGP009 Alkaloid LAMT medium borderline
KN538964.1_FGP012 Alkaloid LAMT medium borderline
KN538964.1_FGP013 Alkaloid LAMT medium borderline
KN538987.1_FGP007 Alkaloid LAMT low borderline
KN539828.1_FGP006 Alkaloid LAMT medium borderline
KN540305.1_FGP001 Alkaloid LAMT medium borderline
KN540305.1_FGP004 Alkaloid LAMT medium pass
KN540323.1_FGP002 Alkaloid LAMT medium borderline
KN540339.1_FGP001 Alkaloid LAMT medium borderline
KN540339.1_FGP002 Alkaloid LAMT medium borderline
KN540339.1_FGP003 Alkaloid LAMT medium borderline
KN540578.1_FGP001 Alkaloid LAMT low borderline
KN540927.1_FGP001 Alkaloid LAMT medium borderline
KN540945.1_FGP001 Alkaloid LAMT medium borderline
KN540982.1_FGP001 Alkaloid LAMT medium borderline
KN541691.1_FGP001 Alkaloid LAMT medium borderline
KN542393.1_FGP001 Alkaloid LAMT low borderline
KN542427.1_FGP001 Alkaloid LAMT medium borderline
KN542738.1_FGP001 Alkaloid LAMT medium borderline
AMDW01035269.1_FGP001 Alkaloid MPO low borderline
KN538693.1_FGP092 Alkaloid MPO low borderline
KN539041.1_FGP001 Alkaloid MPO high pass
KN539062.1_FGP006 Alkaloid MPO low borderline
KN539106.1_FGP009 Alkaloid MPO high pass
KN540893.1_FGP005 Alkaloid MPO medium pass
KN541183.1_FGP001 Alkaloid MPO low borderline
KN541183.1_FGP003 Alkaloid MPO medium pass
KN542430.1_FGP001 Alkaloid MPO high pass