PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

2086
Candidate Protein Records
1740
Pathway-Level Records
4443
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
KN540737.1_FGP004 Alkaloid NMT medium pass
KN540932.1_FGP003 Alkaloid NMT low borderline
KN541022.1_FGP003 Alkaloid NMT low borderline
KN541029.1_FGP002 Alkaloid NMT medium borderline
KN541339.1_FGP001 Alkaloid NMT low borderline
KN541648.1_FGP001 Alkaloid NMT medium pass
KN541754.1_FGP001 Alkaloid NMT medium borderline
KN541848.1_FGP003 Alkaloid NMT medium pass
KN542009.1_FGP002 Alkaloid NMT medium pass
KN545105.1_FGP001 Alkaloid NMT medium borderline
AMDW01019645.1_FGP001 Alkaloid ODC medium pass
KN540164.1_FGP002 Alkaloid ODC low borderline
AMDW01022175.1_FGP001 Alkaloid PMT medium pass
AMDW01034761.1_FGP001 Alkaloid PMT medium pass
KN538744.1_FGP013 Alkaloid PMT medium borderline
KN538760.1_FGP059 Alkaloid PMT low borderline
KN538826.1_FGP056 Alkaloid PMT medium pass
KN538949.1_FGP011 Alkaloid PMT low borderline
KN538961.1_FGP004 Alkaloid PMT medium pass
KN539023.1_FGP011 Alkaloid PMT medium borderline
KN539192.1_FGP008 Alkaloid PMT medium borderline
KN539275.1_FGP006 Alkaloid PMT medium pass
KN539289.1_FGP002 Alkaloid PMT medium pass
KN539312.1_FGP008 Alkaloid PMT medium pass
KN539843.1_FGP001 Alkaloid PMT low borderline
KN539843.1_FGP007 Alkaloid PMT low borderline
KN539942.1_FGP002 Alkaloid PMT low borderline
KN540076.1_FGP001 Alkaloid PMT medium pass
KN540076.1_FGP006 Alkaloid PMT medium pass
KN540080.1_FGP001 Alkaloid PMT medium pass
KN540208.1_FGP001 Alkaloid PMT medium pass
KN540296.1_FGP001 Alkaloid PMT medium pass
KN540560.1_FGP002 Alkaloid PMT medium pass
KN540690.1_FGP002 Alkaloid PMT medium pass
KN540690.1_FGP003 Alkaloid PMT low borderline
KN540756.1_FGP001 Alkaloid PMT medium pass
KN540761.1_FGP003 Alkaloid PMT medium pass
KN541378.1_FGP002 Alkaloid PMT low borderline
KN543869.1_FGP001 Alkaloid PMT low borderline
KN545523.1_FGP001 Alkaloid PMT medium pass
AMDW01024172.1_FGP001 Alkaloid PYKS medium pass
AMDW01024381.1_FGP001 Alkaloid PYKS medium pass
AMDW01030365.1_FGP001 Alkaloid PYKS high pass
AMDW01033029.1_FGP001 Alkaloid PYKS medium pass
AMDW01064998.1_FGP001 Alkaloid PYKS medium pass
KN538691.1_FGP050 Alkaloid PYKS low borderline
KN538724.1_FGP001 Alkaloid PYKS low borderline
KN538769.1_FGP034 Alkaloid PYKS low borderline
KN538816.1_FGP003 Alkaloid PYKS medium pass
KN538816.1_FGP014 Alkaloid PYKS low borderline