PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

2086
Candidate Protein Records
1740
Pathway-Level Records
4443
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
KN540269.1_FGP005 Flavonoid UFGT high pass
KN540297.1_FGP002 Flavonoid UFGT medium pass
KN540297.1_FGP005 Flavonoid UFGT medium pass
KN540334.1_FGP003 Flavonoid UFGT low borderline
KN540336.1_FGP001 Flavonoid UFGT high pass
KN540522.1_FGP003 Flavonoid UFGT medium pass
KN540540.1_FGP006 Flavonoid UFGT high pass
KN540620.1_FGP001 Flavonoid UFGT high pass
KN540620.1_FGP002 Flavonoid UFGT high pass
KN540620.1_FGP008 Flavonoid UFGT high pass
KN540666.1_FGP002 Flavonoid UFGT medium pass
KN540812.1_FGP002 Flavonoid UFGT high pass
KN540812.1_FGP005 Flavonoid UFGT medium pass
KN540823.1_FGP002 Flavonoid UFGT medium pass
KN540823.1_FGP005 Flavonoid UFGT high pass
KN540835.1_FGP001 Flavonoid UFGT high pass
KN540849.1_FGP003 Flavonoid UFGT medium pass
KN540941.1_FGP001 Flavonoid UFGT medium pass
KN541011.1_FGP001 Flavonoid UFGT low borderline
KN541011.1_FGP002 Flavonoid UFGT medium pass
KN541032.1_FGP001 Flavonoid UFGT low borderline
KN541150.1_FGP002 Flavonoid UFGT medium pass
KN541197.1_FGP001 Flavonoid UFGT medium pass
KN541218.1_FGP001 Flavonoid UFGT high pass
KN541218.1_FGP002 Flavonoid UFGT medium pass
KN541274.1_FGP002 Flavonoid UFGT high pass
KN541328.1_FGP002 Flavonoid UFGT medium pass
KN541345.1_FGP003 Flavonoid UFGT high pass
KN541663.1_FGP001 Flavonoid UFGT high pass
KN541737.1_FGP004 Flavonoid UFGT high pass
KN541810.1_FGP001 Flavonoid UFGT high pass
KN541810.1_FGP002 Flavonoid UFGT medium pass
KN541956.1_FGP004 Flavonoid UFGT medium pass
KN542037.1_FGP001 Flavonoid UFGT high pass
KN542050.1_FGP001 Flavonoid UFGT high pass
KN542170.1_FGP002 Flavonoid UFGT medium pass
KN542502.1_FGP001 Flavonoid UFGT medium pass
KN542809.1_FGP001 Flavonoid UFGT low borderline
KN543125.1_FGP001 Flavonoid UFGT medium pass
KN543125.1_FGP002 Flavonoid UFGT low borderline
KN543839.1_FGP001 Flavonoid UFGT high pass
KN544251.1_FGP001 Flavonoid UFGT medium pass
KN544513.1_FGP001 Flavonoid UFGT medium pass
AMDW01039553.1_FGP001 Phenylpropanoid 4CL medium pass
KN538681.1_FGP060 Phenylpropanoid 4CL medium pass
KN538682.1_FGP139 Phenylpropanoid 4CL medium pass
KN538684.1_FGP016 Phenylpropanoid 4CL medium pass
KN538699.1_FGP004 Phenylpropanoid 4CL low borderline
KN538705.1_FGP009 Phenylpropanoid 4CL medium pass
KN538712.1_FGP061 Phenylpropanoid 4CL low borderline