PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

2086
Candidate Protein Records
1740
Pathway-Level Records
4443
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
KN539059.1_FGP013 Alkaloid 8HGO low borderline
KN539059.1_FGP015 Alkaloid 8HGO low borderline
KN539448.1_FGP004 Alkaloid 8HGO medium borderline
KN539448.1_FGP005 Alkaloid 8HGO medium borderline
KN539448.1_FGP007 Alkaloid 8HGO medium borderline
KN539480.1_FGP013 Alkaloid 8HGO medium borderline
KN540243.1_FGP002 Alkaloid 8HGO medium borderline
KN540996.1_FGP001 Alkaloid 8HGO medium borderline
KN541169.1_FGP003 Alkaloid 8HGO medium borderline
KN541268.1_FGP001 Alkaloid 8HGO medium borderline
KN541615.1_FGP001 Alkaloid 8HGO low borderline
KN538808.1_FGP044 Alkaloid ADC medium pass
KN538979.1_FGP018 Alkaloid ADC medium pass
AMDW01021199.1_FGP001 Alkaloid BBE low borderline
AMDW01038031.1_FGP001 Alkaloid BBE medium borderline
KN538681.1_FGP101 Alkaloid BBE medium borderline
KN538681.1_FGP106 Alkaloid BBE medium borderline
KN538681.1_FGP109 Alkaloid BBE medium borderline
KN538707.1_FGP002 Alkaloid BBE medium borderline
KN538947.1_FGP010 Alkaloid BBE medium borderline
KN539287.1_FGP005 Alkaloid BBE medium borderline
KN540080.1_FGP003 Alkaloid BBE low borderline
KN540131.1_FGP004 Alkaloid BBE medium borderline
KN541334.1_FGP002 Alkaloid BBE medium borderline
KN541334.1_FGP003 Alkaloid BBE medium borderline
KN541334.1_FGP004 Alkaloid BBE medium borderline
KN541973.1_FGP001 Alkaloid BBE medium borderline
KN542847.1_FGP001 Alkaloid BBE medium borderline
KN543186.1_FGP001 Alkaloid BBE medium borderline
KN543758.1_FGP001 Alkaloid BBE low borderline
KN548619.1_FGP001 Alkaloid BBE medium borderline
KN548827.1_FGP001 Alkaloid BBE medium borderline
KN538699.1_FGP009 Alkaloid CNMT low borderline
KN538732.1_FGP003 Alkaloid CNMT medium pass
KN538819.1_FGP045 Alkaloid CNMT low borderline
KN539674.1_FGP003 Alkaloid CNMT low borderline
KN539674.1_FGP006 Alkaloid CNMT low borderline
KN539832.1_FGP009 Alkaloid CNMT low borderline
KN539899.1_FGP005 Alkaloid CNMT medium borderline
KN540083.1_FGP001 Alkaloid CNMT medium pass
KN543352.1_FGP002 Alkaloid CNMT low borderline
AMDW01018573.1_FGP001 Alkaloid CODM/T6ODM medium borderline
AMDW01018663.1_FGP001 Alkaloid CODM/T6ODM low borderline
AMDW01030873.1_FGP001 Alkaloid CODM/T6ODM low borderline
AMDW01034664.1_FGP001 Alkaloid CODM/T6ODM medium borderline
AMDW01036777.1_FGP001 Alkaloid CODM/T6ODM medium borderline
AMDW01039283.1_FGP001 Alkaloid CODM/T6ODM medium borderline
KN538692.1_FGP107 Alkaloid CODM/T6ODM medium borderline
KN538734.1_FGP009 Alkaloid CODM/T6ODM medium borderline
KN538745.1_FGP084 Alkaloid CODM/T6ODM medium borderline