PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

2086
Candidate Protein Records
1740
Pathway-Level Records
4443
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
KN541848.1_FGP001 Phenylpropanoid HCT medium pass
KN543869.1_FGP001 Phenylpropanoid HCT medium pass
KN545523.1_FGP001 Phenylpropanoid HCT low borderline
AMDW01008524.1_FGP001 Phenylpropanoid LAC medium pass
AMDW01010436.1_FGP001 Phenylpropanoid LAC medium pass
AMDW01013068.1_FGP001 Phenylpropanoid LAC medium pass
AMDW01020389.1_FGP001 Phenylpropanoid LAC medium pass
AMDW01021044.1_FGP001 Phenylpropanoid LAC medium pass
AMDW01023143.1_FGP001 Phenylpropanoid LAC medium pass
AMDW01030202.1_FGP001 Phenylpropanoid LAC medium pass
AMDW01038118.1_FGP001 Phenylpropanoid LAC medium pass
AMDW01039740.1_FGP001 Phenylpropanoid LAC low borderline
AMDW01128990.1_FGP001 Phenylpropanoid LAC medium pass
KN538682.1_FGP274 Phenylpropanoid LAC low borderline
KN538690.1_FGP002 Phenylpropanoid LAC medium pass
KN538690.1_FGP007 Phenylpropanoid LAC medium pass
KN538690.1_FGP014 Phenylpropanoid LAC medium pass
KN538690.1_FGP084 Phenylpropanoid LAC medium pass
KN538690.1_FGP091 Phenylpropanoid LAC medium pass
KN538804.1_FGP002 Phenylpropanoid LAC medium pass
KN538828.1_FGP035 Phenylpropanoid LAC medium pass
KN538870.1_FGP030 Phenylpropanoid LAC medium pass
KN538898.1_FGP025 Phenylpropanoid LAC medium pass
KN538914.1_FGP017 Phenylpropanoid LAC low borderline
KN538995.1_FGP010 Phenylpropanoid LAC medium pass
KN539012.1_FGP002 Phenylpropanoid LAC medium pass
KN539017.1_FGP007 Phenylpropanoid LAC medium pass
KN539076.1_FGP009 Phenylpropanoid LAC medium pass
KN539209.1_FGP003 Phenylpropanoid LAC medium pass
KN539327.1_FGP012 Phenylpropanoid LAC medium pass
KN539355.1_FGP008 Phenylpropanoid LAC medium pass
KN539735.1_FGP003 Phenylpropanoid LAC medium pass
KN539735.1_FGP008 Phenylpropanoid LAC medium pass
KN539814.1_FGP008 Phenylpropanoid LAC medium pass
KN539831.1_FGP007 Phenylpropanoid LAC medium pass
KN539910.1_FGP002 Phenylpropanoid LAC medium pass
KN539910.1_FGP005 Phenylpropanoid LAC medium pass
KN540452.1_FGP008 Phenylpropanoid LAC low borderline
KN540655.1_FGP003 Phenylpropanoid LAC medium pass
KN540845.1_FGP004 Phenylpropanoid LAC medium pass
KN540851.1_FGP001 Phenylpropanoid LAC medium pass
KN541793.1_FGP002 Phenylpropanoid LAC medium pass
KN541852.1_FGP001 Phenylpropanoid LAC low borderline
KN543269.1_FGP001 Phenylpropanoid LAC medium pass
KN543269.1_FGP002 Phenylpropanoid LAC low borderline
KN543516.1_FGP001 Phenylpropanoid LAC medium pass
KN543619.1_FGP001 Phenylpropanoid LAC medium pass
KN544210.1_FGP001 Phenylpropanoid LAC medium pass
AMDW01016714.1_FGP001 Phenylpropanoid PAL low borderline
AMDW01023722.1_FGP001 Phenylpropanoid PAL medium pass