PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1626
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Orhiscaffold1030004000.1 Rosmarinic Acid C4H medium pass
Orhiscaffold10610007780.1 Rosmarinic Acid C4H medium pass
Orhiscaffold10630007900.2 Rosmarinic Acid C4H low borderline
Orhiscaffold1090010480.1 Rosmarinic Acid C4H low borderline
Orhiscaffold10910010860.1 Rosmarinic Acid C4H medium pass
Orhiscaffold11190013570.1 Rosmarinic Acid C4H medium pass
Orhiscaffold11250014280.1 Rosmarinic Acid C4H low borderline
Orhiscaffold11360015000.1 Rosmarinic Acid C4H low borderline
Orhiscaffold1160016920.1 Rosmarinic Acid C4H low borderline
Orhiscaffold11720018600.1 Rosmarinic Acid C4H low borderline
Orhiscaffold1180019200.1 Rosmarinic Acid C4H low borderline
Orhiscaffold11810019290.1 Rosmarinic Acid C4H low borderline
Orhiscaffold11810019300.1 Rosmarinic Acid C4H low borderline
Orhiscaffold119210020160.1 Rosmarinic Acid C4H medium pass
Orhiscaffold12160022060.1 Rosmarinic Acid C4H low borderline
Orhiscaffold12290023200.1 Rosmarinic Acid C4H medium pass
Orhiscaffold12450024660.1 Rosmarinic Acid C4H low borderline
Orhiscaffold12450024680.1 Rosmarinic Acid C4H low borderline
Orhiscaffold12560025520.1 Rosmarinic Acid C4H medium pass
Orhiscaffold12560025530.1 Rosmarinic Acid C4H low borderline
Orhiscaffold12560025550.1 Rosmarinic Acid C4H low borderline
Orhiscaffold12620026070.1 Rosmarinic Acid C4H low borderline
Orhiscaffold12620026080.1 Rosmarinic Acid C4H low borderline
Orhiscaffold12950028650.1 Rosmarinic Acid C4H medium pass
Orhiscaffold13090030000.1 Rosmarinic Acid C4H low borderline
Orhiscaffold13240031380.1 Rosmarinic Acid C4H medium pass
Orhiscaffold13380032810.1 Rosmarinic Acid C4H low borderline
Orhiscaffold13500033950.1 Rosmarinic Acid C4H low borderline
Orhiscaffold13540034290.1 Rosmarinic Acid C4H low borderline
Orhiscaffold13770035910.1 Rosmarinic Acid C4H low borderline
Orhiscaffold14200040180.1 Rosmarinic Acid C4H medium pass
Orhiscaffold14200040190.1 Rosmarinic Acid C4H low borderline
Orhiscaffold14510042560.1 Rosmarinic Acid C4H medium pass
Orhiscaffold14510042570.1 Rosmarinic Acid C4H medium pass
Orhiscaffold14740044020.1 Rosmarinic Acid C4H medium pass
Orhiscaffold150045840.1 Rosmarinic Acid C4H low borderline
Orhiscaffold150045850.1 Rosmarinic Acid C4H low borderline
Orhiscaffold150045860.1 Rosmarinic Acid C4H low borderline
Orhiscaffold15100046890.1 Rosmarinic Acid C4H low borderline
Orhiscaffold15240047810.1 Rosmarinic Acid C4H medium pass
Orhiscaffold1540048950.1 Rosmarinic Acid C4H low borderline
Orhiscaffold15530050060.1 Rosmarinic Acid C4H medium pass
Orhiscaffold15570050230.1 Rosmarinic Acid C4H low borderline
Orhiscaffold16020053630.1 Rosmarinic Acid C4H low borderline
Orhiscaffold16020053640.1 Rosmarinic Acid C4H low borderline
Orhiscaffold16020053650.1 Rosmarinic Acid C4H low borderline
Orhiscaffold16020053660.2 Rosmarinic Acid C4H low borderline
Orhiscaffold16020053670.1 Rosmarinic Acid C4H low borderline
Orhiscaffold16910059980.1 Rosmarinic Acid C4H low borderline
Orhiscaffold1730063010.1 Rosmarinic Acid C4H low borderline