PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1626
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Gene Pathway Family Confidence Status
Orhiscaffold17380063400.1 Rosmarinic Acid C4H medium pass
Orhiscaffold17390063430.1 Rosmarinic Acid C4H low borderline
Orhiscaffold17450063800.1 Rosmarinic Acid C4H low borderline
Orhiscaffold17790066050.1 Rosmarinic Acid C4H low borderline
Orhiscaffold17790066060.1 Rosmarinic Acid C4H low borderline
Orhiscaffold17910066780.1 Rosmarinic Acid C4H medium pass
Orhiscaffold17910066790.1 Rosmarinic Acid C4H low borderline
Orhiscaffold17980067230.1 Rosmarinic Acid C4H low borderline
Orhiscaffold18100068750.1 Rosmarinic Acid C4H low borderline
Orhiscaffold18480070930.1 Rosmarinic Acid C4H medium pass
Orhiscaffold18480070940.1 Rosmarinic Acid C4H medium pass
Orhiscaffold18480070950.1 Rosmarinic Acid C4H medium pass
Orhiscaffold18480070960.1 Rosmarinic Acid C4H low borderline
Orhiscaffold18720072420.1 Rosmarinic Acid C4H low borderline
Orhiscaffold19210075990.1 Rosmarinic Acid C4H low borderline
Orhiscaffold19530078110.1 Rosmarinic Acid C4H low borderline
Orhiscaffold20081610.1 Rosmarinic Acid C4H low borderline
Orhiscaffold20081610.2 Rosmarinic Acid C4H medium pass
Orhiscaffold2050085550.1 Rosmarinic Acid C4H medium pass
Orhiscaffold20760087060.1 Rosmarinic Acid C4H low borderline
Orhiscaffold20870087900.1 Rosmarinic Acid C4H medium pass
Orhiscaffold210088480.1 Rosmarinic Acid C4H medium pass
Orhiscaffold21320090930.1 Rosmarinic Acid C4H medium pass
Orhiscaffold21450091750.1 Rosmarinic Acid C4H medium pass
Orhiscaffold21740093560.1 Rosmarinic Acid C4H low borderline
Orhiscaffold21740093570.1 Rosmarinic Acid C4H low borderline
Orhiscaffold21910094590.1 Rosmarinic Acid C4H low borderline
Orhiscaffold21930094640.1 Rosmarinic Acid C4H medium pass
Orhiscaffold22060095580.1 Rosmarinic Acid C4H low borderline
Orhiscaffold22390097540.1 Rosmarinic Acid C4H low borderline
Orhiscaffold22790099700.1 Rosmarinic Acid C4H low borderline
Orhiscaffold22800099920.1 Rosmarinic Acid C4H low borderline
Orhiscaffold23310103460.1 Rosmarinic Acid C4H low borderline
Orhiscaffold23510104740.1 Rosmarinic Acid C4H low borderline
Orhiscaffold24180108590.1 Rosmarinic Acid C4H low borderline
Orhiscaffold2470111550.1 Rosmarinic Acid C4H low borderline
Orhiscaffold24940112880.1 Rosmarinic Acid C4H medium pass
Orhiscaffold24940112890.1 Rosmarinic Acid C4H low borderline
Orhiscaffold25470116000.1 Rosmarinic Acid C4H low borderline
Orhiscaffold25710117360.1 Rosmarinic Acid C4H low borderline
Orhiscaffold26130119900.1 Rosmarinic Acid C4H low borderline
Orhiscaffold2630120650.1 Rosmarinic Acid C4H medium pass
Orhiscaffold26330120990.1 Rosmarinic Acid C4H low borderline
Orhiscaffold27580127680.1 Rosmarinic Acid C4H low borderline
Orhiscaffold27700128290.1 Rosmarinic Acid C4H medium pass
Orhiscaffold28100130210.1 Rosmarinic Acid C4H medium pass
Orhiscaffold28100130220.1 Rosmarinic Acid C4H low borderline
Orhiscaffold28380131360.1 Rosmarinic Acid C4H low borderline
Orhiscaffold2880133520.1 Rosmarinic Acid C4H low borderline
Orhiscaffold28890134020.1 Rosmarinic Acid C4H low borderline