PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1626
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Orhiscaffold28950134320.1 Rosmarinic Acid C4H medium pass
Orhiscaffold29090134980.1 Rosmarinic Acid C4H medium pass
Orhiscaffold29200135610.1 Rosmarinic Acid C4H low borderline
Orhiscaffold29230135670.1 Rosmarinic Acid C4H low borderline
Orhiscaffold29810138600.1 Rosmarinic Acid C4H low borderline
Orhiscaffold29810138620.1 Rosmarinic Acid C4H low borderline
Orhiscaffold30000140220.1 Rosmarinic Acid C4H medium pass
Orhiscaffold30060140510.1 Rosmarinic Acid C4H medium pass
Orhiscaffold3040142230.1 Rosmarinic Acid C4H low borderline
Orhiscaffold3050142750.1 Rosmarinic Acid C4H low borderline
Orhiscaffold30790144210.1 Rosmarinic Acid C4H low borderline
Orhiscaffold31980149850.1 Rosmarinic Acid C4H low borderline
Orhiscaffold32360152040.1 Rosmarinic Acid C4H medium pass
Orhiscaffold32420152430.1 Rosmarinic Acid C4H low borderline
Orhiscaffold32580152960.1 Rosmarinic Acid C4H medium pass
Orhiscaffold3260153040.1 Rosmarinic Acid C4H medium pass
Orhiscaffold3300155250.1 Rosmarinic Acid C4H medium pass
Orhiscaffold3300155260.1 Rosmarinic Acid C4H medium pass
Orhiscaffold3300155270.1 Rosmarinic Acid C4H low borderline
Orhiscaffold3300155280.1 Rosmarinic Acid C4H low borderline
Orhiscaffold3300155290.1 Rosmarinic Acid C4H low borderline
Orhiscaffold3300155300.1 Rosmarinic Acid C4H low borderline
Orhiscaffold3300155300.2 Rosmarinic Acid C4H medium pass
Orhiscaffold3300155300.3 Rosmarinic Acid C4H medium pass
Orhiscaffold33330156470.1 Rosmarinic Acid C4H low borderline
Orhiscaffold33330156490.1 Rosmarinic Acid C4H low borderline
Orhiscaffold33330156500.1 Rosmarinic Acid C4H low borderline
Orhiscaffold33330156520.1 Rosmarinic Acid C4H medium pass
Orhiscaffold3390159140.1 Rosmarinic Acid C4H low borderline
Orhiscaffold3460162380.1 Rosmarinic Acid C4H low borderline
Orhiscaffold35760168150.1 Rosmarinic Acid C4H medium pass
Orhiscaffold36140169570.1 Rosmarinic Acid C4H low borderline
Orhiscaffold36300170250.1 Rosmarinic Acid C4H medium pass
Orhiscaffold36970172740.1 Rosmarinic Acid C4H medium pass
Orhiscaffold37340174250.1 Rosmarinic Acid C4H low borderline
Orhiscaffold37340174270.1 Rosmarinic Acid C4H medium pass
Orhiscaffold3770175530.1 Rosmarinic Acid C4H low borderline
Orhiscaffold37830176070.1 Rosmarinic Acid C4H medium pass
Orhiscaffold37830176080.1 Rosmarinic Acid C4H medium pass
Orhiscaffold39880184330.1 Rosmarinic Acid C4H low borderline
Orhiscaffold40520186820.1 Rosmarinic Acid C4H medium pass
Orhiscaffold40870188220.1 Rosmarinic Acid C4H medium pass
Orhiscaffold41190189650.1 Rosmarinic Acid C4H low borderline
Orhiscaffold42210193530.1 Rosmarinic Acid C4H low borderline
Orhiscaffold4260194720.1 Rosmarinic Acid C4H low borderline
Orhiscaffold4300196290.1 Rosmarinic Acid C4H low borderline
Orhiscaffold4490203460.1 Rosmarinic Acid C4H low borderline
Orhiscaffold44930203520.1 Rosmarinic Acid C4H medium pass
Orhiscaffold45290204770.1 Rosmarinic Acid C4H low borderline
Orhiscaffold46170207730.1 Rosmarinic Acid C4H low borderline