PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1626
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Orhiscaffold470210140.1 Rosmarinic Acid C4H low borderline
Orhiscaffold4710210610.1 Rosmarinic Acid C4H low borderline
Orhiscaffold47510212240.1 Rosmarinic Acid C4H low borderline
Orhiscaffold4770212610.1 Rosmarinic Acid C4H low borderline
Orhiscaffold4950218150.1 Rosmarinic Acid C4H low borderline
Orhiscaffold50460222070.1 Rosmarinic Acid C4H low borderline
Orhiscaffold50870223080.1 Rosmarinic Acid C4H low borderline
Orhiscaffold50870223100.1 Rosmarinic Acid C4H low borderline
Orhiscaffold510223390.1 Rosmarinic Acid C4H low borderline
Orhiscaffold510223410.1 Rosmarinic Acid C4H low borderline
Orhiscaffold51610225860.1 Rosmarinic Acid C4H medium pass
Orhiscaffold5250228400.1 Rosmarinic Acid C4H low borderline
Orhiscaffold53150230130.1 Rosmarinic Acid C4H medium pass
Orhiscaffold53210230200.1 Rosmarinic Acid C4H low borderline
Orhiscaffold5420232840.1 Rosmarinic Acid C4H low borderline
Orhiscaffold5420232850.1 Rosmarinic Acid C4H medium pass
Orhiscaffold54410233380.1 Rosmarinic Acid C4H low borderline
Orhiscaffold5460233810.1 Rosmarinic Acid C4H low borderline
Orhiscaffold54720234180.1 Rosmarinic Acid C4H low borderline
Orhiscaffold55690236650.1 Rosmarinic Acid C4H low borderline
Orhiscaffold5660239280.1 Rosmarinic Acid C4H medium pass
Orhiscaffold5660239290.1 Rosmarinic Acid C4H medium pass
Orhiscaffold58370243800.1 Rosmarinic Acid C4H medium pass
Orhiscaffold59270246370.1 Rosmarinic Acid C4H low borderline
Orhiscaffold59760247590.1 Rosmarinic Acid C4H medium pass
Orhiscaffold600248100.1 Rosmarinic Acid C4H low borderline
Orhiscaffold6020248810.1 Rosmarinic Acid C4H low borderline
Orhiscaffold6020248830.1 Rosmarinic Acid C4H low borderline
Orhiscaffold6020248830.2 Rosmarinic Acid C4H low borderline
Orhiscaffold6020248830.3 Rosmarinic Acid C4H medium pass
Orhiscaffold6100250710.1 Rosmarinic Acid C4H low borderline
Orhiscaffold6140251730.1 Rosmarinic Acid C4H medium pass
Orhiscaffold62020253670.1 Rosmarinic Acid C4H low borderline
Orhiscaffold620253400.1 Rosmarinic Acid C4H low borderline
Orhiscaffold620253440.1 Rosmarinic Acid C4H medium pass
Orhiscaffold62070253760.1 Rosmarinic Acid C4H low borderline
Orhiscaffold62510255120.1 Rosmarinic Acid C4H low borderline
Orhiscaffold62830255930.1 Rosmarinic Acid C4H low borderline
Orhiscaffold63630257980.1 Rosmarinic Acid C4H low borderline
Orhiscaffold6420259270.1 Rosmarinic Acid C4H low borderline
Orhiscaffold6470260510.1 Rosmarinic Acid C4H medium pass
Orhiscaffold64950261210.1 Rosmarinic Acid C4H low borderline
Orhiscaffold65400262450.1 Rosmarinic Acid C4H low borderline
Orhiscaffold66320264300.1 Rosmarinic Acid C4H medium pass
Orhiscaffold66890265950.1 Rosmarinic Acid C4H low borderline
Orhiscaffold670266220.1 Rosmarinic Acid C4H medium pass
Orhiscaffold6720266790.1 Rosmarinic Acid C4H low borderline
Orhiscaffold6720266810.1 Rosmarinic Acid C4H low borderline
Orhiscaffold6750267580.1 Rosmarinic Acid C4H low borderline
Orhiscaffold67690267890.1 Rosmarinic Acid C4H low borderline