PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1935
Candidate Protein Records
1626
Pathway-Level Records
4131
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Orhiscaffold67690267920.1 Rosmarinic Acid C4H low borderline
Orhiscaffold67690267940.1 Rosmarinic Acid C4H medium pass
Orhiscaffold67870268390.1 Rosmarinic Acid C4H medium pass
Orhiscaffold69190272120.1 Rosmarinic Acid C4H low borderline
Orhiscaffold6990273730.1 Rosmarinic Acid C4H low borderline
Orhiscaffold70310274840.1 Rosmarinic Acid C4H low borderline
Orhiscaffold70330274880.1 Rosmarinic Acid C4H medium pass
Orhiscaffold70930276140.1 Rosmarinic Acid C4H medium pass
Orhiscaffold70930276150.1 Rosmarinic Acid C4H low borderline
Orhiscaffold71160276540.1 Rosmarinic Acid C4H low borderline
Orhiscaffold73240280130.1 Rosmarinic Acid C4H medium pass
Orhiscaffold74880283320.1 Rosmarinic Acid C4H low borderline
Orhiscaffold7540284280.1 Rosmarinic Acid C4H low borderline
Orhiscaffold760285170.1 Rosmarinic Acid C4H low borderline
Orhiscaffold760285180.1 Rosmarinic Acid C4H low borderline
Orhiscaffold76790286760.1 Rosmarinic Acid C4H medium pass
Orhiscaffold7820290010.1 Rosmarinic Acid C4H low borderline
Orhiscaffold79480292190.1 Rosmarinic Acid C4H low borderline
Orhiscaffold79930293170.1 Rosmarinic Acid C4H low borderline
Orhiscaffold79960293210.1 Rosmarinic Acid C4H low borderline
Orhiscaffold8100295710.1 Rosmarinic Acid C4H low borderline
Orhiscaffold8140296340.1 Rosmarinic Acid C4H low borderline
Orhiscaffold83680299430.1 Rosmarinic Acid C4H low borderline
Orhiscaffold83680299440.1 Rosmarinic Acid C4H medium pass
Orhiscaffold83750299580.1 Rosmarinic Acid C4H low borderline
Orhiscaffold8440300610.1 Rosmarinic Acid C4H medium pass
Orhiscaffold85120301650.1 Rosmarinic Acid C4H low borderline
Orhiscaffold86990304250.1 Rosmarinic Acid C4H low borderline
Orhiscaffold8730304720.1 Rosmarinic Acid C4H low borderline
Orhiscaffold87940305450.1 Rosmarinic Acid C4H low borderline
Orhiscaffold9020309250.1 Rosmarinic Acid C4H medium pass
Orhiscaffold90308520.1 Rosmarinic Acid C4H low borderline
Orhiscaffold90740309800.1 Rosmarinic Acid C4H low borderline
Orhiscaffold91060310250.1 Rosmarinic Acid C4H low borderline
Orhiscaffold91750311110.1 Rosmarinic Acid C4H low borderline
Orhiscaffold950315280.1 Rosmarinic Acid C4H low borderline
Orhiscaffold11580016800.1 Rosmarinic Acid CPR low borderline
Orhiscaffold13720035850.1 Rosmarinic Acid CPR medium pass
Orhiscaffold15300048390.1 Rosmarinic Acid CPR low borderline
Orhiscaffold19320076690.1 Rosmarinic Acid CPR medium pass
Orhiscaffold19320076710.1 Rosmarinic Acid CPR medium pass
Orhiscaffold21400091460.1 Rosmarinic Acid CPR medium pass
Orhiscaffold22070095690.1 Rosmarinic Acid CPR low borderline
Orhiscaffold23530104810.1 Rosmarinic Acid CPR low borderline
Orhiscaffold32320151870.1 Rosmarinic Acid CPR low borderline
Orhiscaffold56970240230.1 Rosmarinic Acid CPR low borderline
Orhiscaffold57140240730.1 Rosmarinic Acid CPR medium pass
Orhiscaffold5750241610.1 Rosmarinic Acid CPR medium pass
Orhiscaffold8000293790.1 Rosmarinic Acid CPR low borderline
Orhiscaffold10070001200.1 Rosmarinic Acid HPPR low borderline