PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1626
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Orhiscaffold70930276150.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold73240280130.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold74880283320.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold7540284280.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold76790286760.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold83680299430.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold8440300610.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold84570300860.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold86990304250.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold87940305450.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold87940305460.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold9020309250.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold90308520.1 Flavonoid F3'H/CYP75B low borderline
Orhiscaffold91750311110.1 Flavonoid F3'H/CYP75B medium borderline
Orhiscaffold1020002840.1 Flavonoid F3H medium borderline
Orhiscaffold10640007970.1 Flavonoid F3H medium borderline
Orhiscaffold10690008500.1 Flavonoid F3H medium borderline
Orhiscaffold1130014480.1 Flavonoid F3H medium borderline
Orhiscaffold11540016520.1 Flavonoid F3H medium pass
Orhiscaffold1340033210.1 Flavonoid F3H low borderline
Orhiscaffold1340033220.1 Flavonoid F3H low borderline
Orhiscaffold13630034860.1 Flavonoid F3H medium borderline
Orhiscaffold1540048960.1 Flavonoid F3H low borderline
Orhiscaffold16110054510.1 Flavonoid F3H medium borderline
Orhiscaffold16300056080.1 Flavonoid F3H medium pass
Orhiscaffold18550071440.1 Flavonoid F3H medium borderline
Orhiscaffold1890073640.1 Flavonoid F3H low borderline
Orhiscaffold1910075120.1 Flavonoid F3H medium borderline
Orhiscaffold19200075870.1 Flavonoid F3H low borderline
Orhiscaffold19370077040.1 Flavonoid F3H medium borderline
Orhiscaffold2020083510.1 Flavonoid F3H low borderline
Orhiscaffold20290084100.1 Flavonoid F3H medium borderline
Orhiscaffold22950100870.1 Flavonoid F3H medium borderline
Orhiscaffold2310102170.1 Flavonoid F3H medium borderline
Orhiscaffold25100114190.1 Flavonoid F3H medium borderline
Orhiscaffold25850118120.1 Flavonoid F3H medium pass
Orhiscaffold26060119630.1 Flavonoid F3H medium borderline
Orhiscaffold26130119920.1 Flavonoid F3H medium borderline
Orhiscaffold26640122410.1 Flavonoid F3H medium borderline
Orhiscaffold27100125200.1 Flavonoid F3H medium borderline
Orhiscaffold29320136230.1 Flavonoid F3H low borderline
Orhiscaffold31130146260.1 Flavonoid F3H medium borderline
Orhiscaffold31650148680.1 Flavonoid F3H low borderline
Orhiscaffold32020150230.1 Flavonoid F3H medium pass
Orhiscaffold32020150240.1 Flavonoid F3H medium borderline
Orhiscaffold3500164570.1 Flavonoid F3H medium borderline
Orhiscaffold35410166470.1 Flavonoid F3H medium borderline
Orhiscaffold36980172750.1 Flavonoid F3H low borderline
Orhiscaffold36980172760.1 Flavonoid F3H low borderline
Orhiscaffold3750174910.1 Flavonoid F3H medium borderline