PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1935
Candidate Protein Records
1626
Pathway-Level Records
4131
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Orhiscaffold37340174250.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold40520186820.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold50870223100.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold51610225860.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold55690236650.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold6020248830.2 Alkaloid G8O/G8H medium borderline
Orhiscaffold62830255930.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold69190272120.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold76790286750.1 Alkaloid G8O/G8H low borderline
Orhiscaffold7960292460.1 Alkaloid G8O/G8H low borderline
Orhiscaffold85120301650.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold8730304720.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold88340306130.1 Alkaloid G8O/G8H medium pass
Orhiscaffold90740309800.1 Alkaloid G8O/G8H medium pass
Orhiscaffold9390314240.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold10090001480.1 Alkaloid GES low borderline
Orhiscaffold10810009610.1 Alkaloid GES low borderline
Orhiscaffold10810009630.1 Alkaloid GES medium pass
Orhiscaffold11320014650.1 Alkaloid GES medium pass
Orhiscaffold12340023690.1 Alkaloid GES medium pass
Orhiscaffold12340023690.2 Alkaloid GES medium pass
Orhiscaffold13320032350.1 Alkaloid GES low borderline
Orhiscaffold13320032360.1 Alkaloid GES medium pass
Orhiscaffold14140039500.1 Alkaloid GES medium pass
Orhiscaffold14910045280.1 Alkaloid GES medium pass
Orhiscaffold14910045290.1 Alkaloid GES medium pass
Orhiscaffold15100046880.1 Alkaloid GES low borderline
Orhiscaffold15100046900.1 Alkaloid GES low borderline
Orhiscaffold16190054880.1 Alkaloid GES low borderline
Orhiscaffold16190054890.1 Alkaloid GES low borderline
Orhiscaffold16790058910.1 Alkaloid GES low borderline
Orhiscaffold19290076310.1 Alkaloid GES low borderline
Orhiscaffold22800099910.1 Alkaloid GES medium pass
Orhiscaffold26280120510.1 Alkaloid GES medium pass
Orhiscaffold26280120530.1 Alkaloid GES medium pass
Orhiscaffold26950124100.1 Alkaloid GES medium pass
Orhiscaffold2830131100.1 Alkaloid GES low borderline
Orhiscaffold30800144260.1 Alkaloid GES medium pass
Orhiscaffold30800144270.1 Alkaloid GES medium pass
Orhiscaffold31370147300.1 Alkaloid GES medium pass
Orhiscaffold32500152740.1 Alkaloid GES low borderline
Orhiscaffold32730153660.1 Alkaloid GES medium pass
Orhiscaffold34380161520.1 Alkaloid GES low borderline
Orhiscaffold35340166100.1 Alkaloid GES low borderline
Orhiscaffold36970172730.1 Alkaloid GES medium pass
Orhiscaffold37690175500.1 Alkaloid GES medium pass
Orhiscaffold38280178060.1 Alkaloid GES medium pass
Orhiscaffold39230181870.1 Alkaloid GES medium pass
Orhiscaffold40390186290.1 Alkaloid GES medium pass
Orhiscaffold440200200.1 Alkaloid GES low borderline