PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1935
Candidate Protein Records
1626
Pathway-Level Records
4131
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Orhiscaffold6710266470.1 Alkaloid COR medium pass
Orhiscaffold6710266480.1 Alkaloid COR medium pass
Orhiscaffold6710266490.1 Alkaloid COR medium pass
Orhiscaffold81880296930.1 Alkaloid COR medium pass
Orhiscaffold12160022060.1 Alkaloid CYP719 medium borderline
Orhiscaffold17980067230.1 Alkaloid CYP719 medium borderline
Orhiscaffold20081610.1 Alkaloid CYP719 medium borderline
Orhiscaffold2470111550.1 Alkaloid CYP719 medium borderline
Orhiscaffold10000000880.1 Alkaloid CYP80B1 medium borderline
Orhiscaffold12570025640.1 Alkaloid CYP80B1 medium borderline
Orhiscaffold18480070960.1 Alkaloid CYP80B1 medium borderline
Orhiscaffold23300103350.1 Alkaloid CYP80B1 low borderline
Orhiscaffold32360152050.1 Alkaloid CYP80B1 low borderline
Orhiscaffold53150230120.1 Alkaloid CYP80B1 low borderline
Orhiscaffold67690267890.1 Alkaloid CYP80B1 medium borderline
Orhiscaffold74880283320.1 Alkaloid CYP80B1 medium borderline
Orhiscaffold9130310660.1 Alkaloid CYP80B1 low borderline
Orhiscaffold91750311110.1 Alkaloid CYP80B1 medium borderline
Orhiscaffold54910234500.1 Alkaloid CYP80F1 medium borderline
Orhiscaffold5750241760.1 Alkaloid CYP80F1 low borderline
Orhiscaffold8100295650.1 Alkaloid CYP80F1 medium borderline
Orhiscaffold11810019300.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold12450024660.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold12450024680.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold12620026080.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold12950028660.1 Alkaloid G8O/G8H low borderline
Orhiscaffold13090030000.1 Alkaloid G8O/G8H low borderline
Orhiscaffold13500033950.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold13770035910.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold14740044020.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold14740044030.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold150045840.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold150045850.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold150045860.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold17790066050.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold19210075990.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold2010082890.1 Alkaloid G8O/G8H low borderline
Orhiscaffold21740093560.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold23510104740.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold25710117360.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold2630120650.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold28100130220.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold28380131360.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold29230135680.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold29810138600.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold29810138620.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold30880144530.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold31980149850.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold32420152430.1 Alkaloid G8O/G8H medium borderline
Orhiscaffold3300155270.1 Alkaloid G8O/G8H medium borderline