PlantSME Plant secondary metabolism enzyme database

Oryza rhizomatis (oryza_rhizomatis)

Imported from atlas release summary for Oryza rhizomatis.

1935
Candidate Protein Records
1626
Pathway-Level Records
4131
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 493 19 UGT (176) View species results
Alkaloid pathway 324 23 7DLGT (67) View species results
Phenylpropanoid pathway 314 12 POD (149) View species results
Flavonoid pathway 262 13 UFGT (158) View species results
Rosmarinic acid pathway 147 7 C4H (75) View species results
Steroid pathway 86 12 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1654 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 320 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Orhiscaffold920311580.1 Alkaloid CNMT low borderline
Orhiscaffold9690317460.1 Alkaloid CNMT low borderline
Orhiscaffold9690317470.1 Alkaloid CNMT low borderline
Orhiscaffold10640007970.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold10690008500.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold13630034860.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold16650057940.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold18550071440.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold1910075120.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold19370077040.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold19660078910.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold20290084100.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold22950100870.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold25850118120.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold26060119630.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold26640122410.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold2690123670.1 Alkaloid CODM/T6ODM low borderline
Orhiscaffold29320136220.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold29320136230.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold32020150240.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold3500164570.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold3750174910.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold38100177480.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold42390194140.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold4270195010.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold43470198180.2 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold44220201190.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold45920206870.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold49740218950.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold49740218960.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold5130224770.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold5170226070.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold5200227150.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold5370231500.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold63480257430.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold6730266890.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold67560267620.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold730279600.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold73650281020.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold7520283910.1 Alkaloid CODM/T6ODM medium borderline
Orhiscaffold14960045470.1 Alkaloid COR medium pass
Orhiscaffold1790066520.1 Alkaloid COR low borderline
Orhiscaffold1790066530.1 Alkaloid COR medium pass
Orhiscaffold2190094410.1 Alkaloid COR low borderline
Orhiscaffold2340103920.1 Alkaloid COR low borderline
Orhiscaffold37680175410.1 Alkaloid COR low borderline
Orhiscaffold38800179790.1 Alkaloid COR low borderline
Orhiscaffold4550205530.1 Alkaloid COR medium pass
Orhiscaffold57590241990.1 Alkaloid COR medium pass
Orhiscaffold6710266460.1 Alkaloid COR medium pass