Oryza sativa.spMH63 (oryza_sativa_spmh63)
Imported from atlas release summary for Oryza sativa.spMH63.
3376
Candidate Protein Records
2546
Pathway-Level Records
6545
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
6545
Family-Level Calls
BAHD
6.75%
C3'H/CYP98A
5.38%
C4H
5.27%
POD
4.75%
UGT
3.73%
T3O
3.39%
IFS
3.39%
4CL
3.39%
Other Families
63.94%
More Families (98)
7DLGT
218
3.33%
UFGT
218
3.33%
CYP76
177
2.7%
NMT
172
2.63%
STR
151
2.31%
DWF4/CYP90B1
128
1.96%
F3'H/CYP75B
126
1.93%
SMT1/SMT2/SMT3
121
1.85%
BR6OX2/CYP85A2
121
1.85%
CAD
118
1.8%
F3H
117
1.79%
CAS
109
1.67%
TPS
105
1.6%
CYP71
103
1.57%
SGD
94
1.44%
GES
91
1.39%
IFR
89
1.36%
TRI/TRII
72
1.1%
CODM/T6ODM
68
1.04%
CSE
65
0.99%
PYKS
64
0.98%
ANR
62
0.95%
CYP90D1
61
0.93%
H6H
59
0.9%
CCR
58
0.89%
FNS
57
0.87%
RAS
54
0.83%
G8O/G8H
53
0.81%
LAC
53
0.81%
T16H
50
0.76%
HCT
50
0.76%
COMT
49
0.75%
PMT
47
0.72%
GS
44
0.67%
SLS
41
0.63%
CHS
39
0.6%
DFR
39
0.6%
16OMT
38
0.58%
F5H/CYP84A
38
0.58%
CPD/CYP90A1
38
0.58%
NCS
33
0.5%
PAL
33
0.5%
BR6OX1/CYP85A1
33
0.5%
IO
32
0.49%
COR
32
0.49%
F3'5'H/CYP75A
31
0.47%
CYP51G1
31
0.47%
8HGO
25
0.38%
CNMT
24
0.37%
FPPS
24
0.37%
BBE
22
0.34%
TAT
21
0.32%
ROT3/CYP90C1
21
0.32%
LAMT
20
0.31%
MVK
19
0.29%
MPO
17
0.26%
CPR
17
0.26%
GGPPS
17
0.26%
ANS/LDOX
16
0.24%
SQS/FDFT1
16
0.24%
AACT
15
0.23%
7DLH
13
0.2%
CHI
13
0.2%
TDC
12
0.18%
HPPR
12
0.18%
PMK
11
0.17%
XMT_MXMT_DXMT
10
0.15%
TYDC_DDC
9
0.14%
CYP719
9
0.14%
DXS
9
0.14%
CYP80B1
8
0.12%
CYP80F1
8
0.12%
CCoAOMT
8
0.12%
SMO1/SMO2
8
0.12%
MVD
8
0.12%
HMGR
8
0.12%
ADC
7
0.11%
DWF7
6
0.09%
FK
6
0.09%
FLS
5
0.08%
CMK/IspE
5
0.08%
MDS/IspF
5
0.08%
HMGS
5
0.08%
MCT/IspD
5
0.08%
DET2
4
0.06%
DWF5
4
0.06%
DWF1
4
0.06%
DXR
4
0.06%
ODC
3
0.05%
ISY
3
0.05%
CPI1
3
0.05%
HDR/IspH
3
0.05%
GPPS
3
0.05%
6OMT_4OMT_SOMT
2
0.03%
HYD1
2
0.03%
IDI
2
0.03%
SQE
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 762 | 20 | BAHD (305) | View species results |
| Alkaloid pathway | 596 | 20 | 7DLGT (86) | View species results |
| Phenylpropanoid pathway | 482 | 11 | POD (254) | View species results |
| Flavonoid pathway | 332 | 13 | UFGT (188) | View species results |
| Steroid pathway | 196 | 13 | CAS (80) | View species results |
| Rosmarinic acid pathway | 178 | 7 | C4H (80) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2263 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 546 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| OsatMH6301G0000470.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6301G0000490.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6301G0007210.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6301G0007770.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6301G0011680.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6301G0011680.2 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6301G0017610.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6301G0023620.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6301G0026770.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6301G0041020.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6301G0041030.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6302G0001770.2 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6302G0019620.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6302G0019620.2 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6302G0019620.3 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6302G0039330.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6302G0039330.2 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6302G0039330.3 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6302G0050900.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6302G0050900.2 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6302G0058570.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6302G0058570.2 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6304G0007450.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6304G0039190.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6304G0039190.2 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6304G0039190.3 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6304G0048690.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6305G0001460.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6305G0007150.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6305G0017450.2 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6306G0004840.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6306G0007330.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6306G0007350.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6306G0047260.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6307G0030400.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6308G0043250.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6308G0043250.2 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6308G0043250.3 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6308G0043250.4 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6308G0043250.5 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6309G0025570.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6309G0036060.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6310G0000940.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6310G0000960.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6310G0002740.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6310G0016720.1 | Rosmarinic Acid | RAS | medium | pass |
| OsatMH6310G0020990.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6310G0020990.2 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6310G0021030.1 | Rosmarinic Acid | RAS | low | borderline |
| OsatMH6310G0021090.1 | Rosmarinic Acid | RAS | low | borderline |