PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Pvir09KG0020370.4 Alkaloid 8HGO low borderline
Pvir09KG0031070.1 Alkaloid 8HGO medium borderline
Pvir09KG0031070.2 Alkaloid 8HGO medium borderline
Pvir09KG0031070.3 Alkaloid 8HGO medium borderline
Pvir09KG0031090.1 Alkaloid 8HGO medium borderline
Pvir09KG0053710.1 Alkaloid 8HGO low borderline
Pvir09KG0055900.1 Alkaloid 8HGO medium borderline
Pvir09KG0055910.1 Alkaloid 8HGO medium borderline
Pvir09KG0055920.1 Alkaloid 8HGO medium borderline
Pvir09KG0055930.1 Alkaloid 8HGO medium borderline
Pvir09NG0020520.1 Alkaloid 8HGO low borderline
Pvir09NG0020520.3 Alkaloid 8HGO low borderline
Pvir09NG0022840.1 Alkaloid 8HGO medium pass
Pvir09NG0030310.1 Alkaloid 8HGO medium borderline
Pvir09NG0030320.1 Alkaloid 8HGO low borderline
Pvir09NG0053210.3 Alkaloid 8HGO low borderline
Pvir09NG0055370.1 Alkaloid 8HGO medium borderline
Pvir09NG0055370.2 Alkaloid 8HGO medium borderline
Pvir09NG0055380.1 Alkaloid 8HGO medium borderline
Pvir09NG0055390.1 Alkaloid 8HGO medium borderline
Pvir09NG0055390.2 Alkaloid 8HGO medium borderline
Pvir09NG0055390.3 Alkaloid 8HGO medium borderline
Pvir09NG0055410.1 Alkaloid 8HGO medium borderline
Pvir09NG0055420.1 Alkaloid 8HGO medium borderline
Pvir04KG0002510.1 Alkaloid ADC medium pass
Pvir04NG0002200.1 Alkaloid ADC medium pass
Pvir06KG0013780.1 Alkaloid ADC medium pass
Pvir06KG0013790.1 Alkaloid ADC low borderline
Pvir06NG0014530.1 Alkaloid ADC medium pass
Pvir08NG0021290.1 Alkaloid ADC low borderline
Pvir08NG0021290.2 Alkaloid ADC low borderline
Pvir01KG0012310.1 Alkaloid BBE medium borderline
Pvir01NG0011260.1 Alkaloid BBE medium borderline
Pvir02KG0005090.1 Alkaloid BBE low borderline
Pvir02NG0004300.1 Alkaloid BBE low borderline
Pvir04KG0021500.1 Alkaloid BBE medium borderline
Pvir04KG0021540.1 Alkaloid BBE medium borderline
Pvir04KG0021560.1 Alkaloid BBE medium borderline
Pvir04KG0021580.1 Alkaloid BBE medium borderline
Pvir04KG0021980.1 Alkaloid BBE medium borderline
Pvir04KG0021990.1 Alkaloid BBE medium borderline
Pvir04KG0022210.1 Alkaloid BBE medium borderline
Pvir04KG0022220.1 Alkaloid BBE medium borderline
Pvir04KG0022230.1 Alkaloid BBE medium borderline
Pvir04KG0022300.1 Alkaloid BBE medium borderline
Pvir04KG0022310.1 Alkaloid BBE medium borderline
Pvir04KG0022320.1 Alkaloid BBE medium borderline
Pvir04KG0022340.1 Alkaloid BBE medium borderline
Pvir04KG0022350.1 Alkaloid BBE medium borderline
Pvir04KG0022590.1 Alkaloid BBE medium borderline