PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir04KG0022630.1 Alkaloid BBE medium borderline
Pvir04NG0018440.1 Alkaloid BBE medium borderline
Pvir04NG0018500.1 Alkaloid BBE medium borderline
Pvir04NG0020110.1 Alkaloid BBE medium borderline
Pvir04NG0020120.1 Alkaloid BBE medium borderline
Pvir04NG0020130.1 Alkaloid BBE medium borderline
Pvir04NG0020140.1 Alkaloid BBE medium borderline
Pvir04NG0020160.1 Alkaloid BBE medium borderline
Pvir04NG0020380.1 Alkaloid BBE medium borderline
Pvir04NG0020450.1 Alkaloid BBE medium borderline
Pvir04NG0020460.1 Alkaloid BBE medium borderline
Pvir05KG0012160.1 Alkaloid BBE medium borderline
Pvir05NG0012210.1 Alkaloid BBE medium borderline
Pvir05NG0018800.1 Alkaloid BBE medium borderline
Pvir06KG0005480.1 Alkaloid BBE medium borderline
Pvir06KG0005510.1 Alkaloid BBE low borderline
Pvir06KG0005520.1 Alkaloid BBE medium borderline
Pvir06KG0006380.1 Alkaloid BBE medium borderline
Pvir06KG0027950.1 Alkaloid BBE medium borderline
Pvir06KG0027960.1 Alkaloid BBE medium borderline
Pvir06NG0005640.1 Alkaloid BBE medium borderline
Pvir06NG0005650.1 Alkaloid BBE medium borderline
Pvir06NG0014200.1 Alkaloid BBE medium borderline
Pvir06NG0026620.1 Alkaloid BBE medium borderline
Pvir07KG0003130.1 Alkaloid BBE medium borderline
Pvir07NG0005650.1 Alkaloid BBE medium borderline
Pvir08KG0017310.1 Alkaloid BBE medium borderline
Pvir08NG0014880.1 Alkaloid BBE medium borderline
Pvir08NG0014890.1 Alkaloid BBE medium borderline
Pvir09KG0054350.1 Alkaloid BBE low borderline
Pvir09NG0053880.1 Alkaloid BBE low borderline
Pvir09NG0061540.1 Alkaloid BBE medium borderline
Pvir09NG0061540.2 Alkaloid BBE medium borderline
Pvir02KG0014470.1 Alkaloid CNMT low borderline
Pvir02KG0014470.2 Alkaloid CNMT low borderline
Pvir02KG0014920.1 Alkaloid CNMT medium pass
Pvir02KG0014930.1 Alkaloid CNMT medium pass
Pvir02NG0012460.1 Alkaloid CNMT low borderline
Pvir02NG0012460.2 Alkaloid CNMT low borderline
Pvir02NG0012460.3 Alkaloid CNMT low borderline
Pvir02NG0012460.4 Alkaloid CNMT low borderline
Pvir02NG0012460.5 Alkaloid CNMT low borderline
Pvir02NG0012460.6 Alkaloid CNMT low borderline
Pvir02NG0012790.1 Alkaloid CNMT medium pass
Pvir02NG0012790.2 Alkaloid CNMT medium pass
Pvir02NG0012840.1 Alkaloid CNMT medium pass
Pvir02NG0012840.10 Alkaloid CNMT medium pass
Pvir02NG0012840.11 Alkaloid CNMT medium pass
Pvir02NG0012840.12 Alkaloid CNMT medium pass
Pvir02NG0012840.13 Alkaloid CNMT medium pass