PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir06KG0004820.1 Alkaloid G8O/G8H medium borderline
Pvir06KG0004840.1 Alkaloid G8O/G8H medium borderline
Pvir06KG0006800.1 Alkaloid G8O/G8H medium pass
Pvir06KG0016110.1 Alkaloid G8O/G8H medium borderline
Pvir06KG0017160.1 Alkaloid G8O/G8H medium borderline
Pvir06KG0023210.1 Alkaloid G8O/G8H medium borderline
Pvir06NG0004280.1 Alkaloid G8O/G8H medium borderline
Pvir06NG0004970.1 Alkaloid G8O/G8H medium borderline
Pvir06NG0006630.1 Alkaloid G8O/G8H medium borderline
Pvir06NG0015640.1 Alkaloid G8O/G8H medium borderline
Pvir06NG0021680.1 Alkaloid G8O/G8H medium borderline
Pvir06NG0021680.2 Alkaloid G8O/G8H medium borderline
Pvir06NG0029310.2 Alkaloid G8O/G8H low borderline
Pvir07KG0021430.1 Alkaloid G8O/G8H low borderline
Pvir07KG0035480.1 Alkaloid G8O/G8H medium borderline
Pvir07NG0008110.1 Alkaloid G8O/G8H medium pass
Pvir07NG0033780.1 Alkaloid G8O/G8H medium borderline
Pvir08KG0011640.1 Alkaloid G8O/G8H low borderline
Pvir08KG0011640.2 Alkaloid G8O/G8H medium borderline
Pvir08KG0017040.1 Alkaloid G8O/G8H medium borderline
Pvir09KG0020220.1 Alkaloid G8O/G8H medium borderline
Pvir09KG0031480.2 Alkaloid G8O/G8H low borderline
Pvir09KG0031480.4 Alkaloid G8O/G8H low borderline
Pvir09KG0032440.1 Alkaloid G8O/G8H medium borderline
Pvir09KG0039860.1 Alkaloid G8O/G8H medium borderline
Pvir09KG0039860.2 Alkaloid G8O/G8H medium borderline
Pvir09KG0039860.5 Alkaloid G8O/G8H medium borderline
Pvir09KG0039860.6 Alkaloid G8O/G8H medium borderline
Pvir09NG0008280.1 Alkaloid G8O/G8H medium borderline
Pvir09NG0020390.1 Alkaloid G8O/G8H medium borderline
Pvir09NG0042480.1 Alkaloid G8O/G8H medium pass
Pvir01KG0001900.1 Alkaloid GES medium pass
Pvir01KG0001900.2 Alkaloid GES medium pass
Pvir01KG0001920.1 Alkaloid GES medium pass
Pvir01KG0001930.1 Alkaloid GES medium pass
Pvir01KG0001940.1 Alkaloid GES medium pass
Pvir01KG0001950.1 Alkaloid GES medium pass
Pvir01KG0001980.1 Alkaloid GES medium pass
Pvir01KG0001980.2 Alkaloid GES medium pass
Pvir01KG0002010.1 Alkaloid GES medium pass
Pvir01KG0002010.2 Alkaloid GES medium pass
Pvir01KG0002020.1 Alkaloid GES medium pass
Pvir01KG0002020.2 Alkaloid GES medium pass
Pvir01KG0002040.1 Alkaloid GES medium pass
Pvir01KG0018740.1 Alkaloid GES medium pass
Pvir01KG0018740.2 Alkaloid GES medium pass
Pvir01KG0018750.1 Alkaloid GES medium pass
Pvir01KG0018760.1 Alkaloid GES medium pass
Pvir01KG0018760.2 Alkaloid GES medium pass
Pvir01KG0018760.3 Alkaloid GES medium pass