PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir09NG0042720.1 Flavonoid F3H medium borderline
Pvir09NG0042740.1 Flavonoid F3H medium borderline
Pvir09NG0042740.2 Flavonoid F3H medium borderline
Pvir09NG0042760.1 Flavonoid F3H medium borderline
Pvir09NG0047710.1 Flavonoid F3H medium borderline
Pvir09NG0061080.1 Flavonoid F3H medium borderline
Pvir09NG0061080.2 Flavonoid F3H medium borderline
Pvir09NG0063020.1 Flavonoid F3H medium borderline
Pvir01KG0019110.1 Flavonoid FLS medium borderline
Pvir01KG0019110.2 Flavonoid FLS medium borderline
Pvir01NG0042930.1 Flavonoid FLS medium borderline
Pvir04KG0026320.1 Flavonoid FLS low borderline
Pvir04NG0005700.1 Flavonoid FLS low borderline
Pvir05KG0016030.2 Flavonoid FLS medium borderline
Pvir07KG0012340.1 Flavonoid FLS medium borderline
Pvir09KG0038840.1 Flavonoid FLS medium borderline
Pvir01KG0011360.1 Flavonoid FNS medium borderline
Pvir01KG0011360.2 Flavonoid FNS medium borderline
Pvir01KG0011360.3 Flavonoid FNS medium borderline
Pvir01KG0032900.1 Flavonoid FNS medium borderline
Pvir01NG0006770.1 Flavonoid FNS medium borderline
Pvir01NG0010120.1 Flavonoid FNS medium borderline
Pvir01NG0010120.2 Flavonoid FNS medium borderline
Pvir01NG0010120.3 Flavonoid FNS medium borderline
Pvir01NG0032170.1 Flavonoid FNS medium borderline
Pvir02NG0000440.1 Flavonoid FNS medium borderline
Pvir02NG0000440.2 Flavonoid FNS medium borderline
Pvir02NG0021260.1 Flavonoid FNS low borderline
Pvir02NG0022280.1 Flavonoid FNS medium borderline
Pvir02NG0032210.2 Flavonoid FNS medium borderline
Pvir03KG0022800.1 Flavonoid FNS medium borderline
Pvir03KG0036980.1 Flavonoid FNS medium borderline
Pvir03NG0021300.1 Flavonoid FNS medium borderline
Pvir03NG0024190.1 Flavonoid FNS medium borderline
Pvir03NG0044140.1 Flavonoid FNS medium borderline
Pvir03NG0044160.1 Flavonoid FNS medium borderline
Pvir04KG0018470.1 Flavonoid FNS medium borderline
Pvir04NG0019320.1 Flavonoid FNS medium borderline
Pvir04NG0019320.2 Flavonoid FNS medium borderline
Pvir04NG0019930.1 Flavonoid FNS low borderline
Pvir05KG0025040.1 Flavonoid FNS low borderline
Pvir05NG0028130.1 Flavonoid FNS medium borderline
Pvir05NG0052740.1 Flavonoid FNS medium borderline
Pvir06KG0016110.1 Flavonoid FNS medium borderline
Pvir06KG0019670.1 Flavonoid FNS medium borderline
Pvir06KG0029700.1 Flavonoid FNS medium borderline
Pvir06NG0006630.1 Flavonoid FNS medium borderline
Pvir06NG0017920.1 Flavonoid FNS medium borderline
Pvir06NG0021630.1 Flavonoid FNS medium borderline
Pvir07KG0021430.1 Flavonoid FNS medium borderline