PlantSME Plant secondary metabolism enzyme database

Panicum virgatum (panicum_virgatum)

Imported from atlas release summary for Panicum virgatum.

6488
Candidate Protein Records
5617
Pathway-Level Records
12778
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1471 20 BAHD (546) View species results
Alkaloid pathway 1354 25 7DLGT (243) View species results
Phenylpropanoid pathway 1185 11 POD (599) View species results
Flavonoid pathway 712 13 UFGT (422) View species results
Rosmarinic acid pathway 466 7 C4H (205) View species results
Steroid pathway 429 12 CAS (177) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4263 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 994 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pvir08KG0011200.1 Flavonoid FNS medium borderline
Pvir08KG0011230.3 Flavonoid FNS medium borderline
Pvir08KG0017040.1 Flavonoid FNS medium borderline
Pvir08KG0019780.1 Flavonoid FNS medium borderline
Pvir08KG0019780.2 Flavonoid FNS medium borderline
Pvir08KG0024500.1 Flavonoid FNS medium pass
Pvir08NG0016630.1 Flavonoid FNS medium borderline
Pvir08NG0016630.2 Flavonoid FNS medium borderline
Pvir08NG0016630.4 Flavonoid FNS medium borderline
Pvir08NG0016630.6 Flavonoid FNS medium borderline
Pvir08NG0026020.1 Flavonoid FNS medium borderline
Pvir09KG0002110.1 Flavonoid FNS medium borderline
Pvir09KG0007970.1 Flavonoid FNS low borderline
Pvir09KG0018020.1 Flavonoid FNS medium borderline
Pvir09KG0021510.1 Flavonoid FNS medium borderline
Pvir09NG0002120.1 Flavonoid FNS medium borderline
Pvir09NG0018070.1 Flavonoid FNS medium borderline
Pvir09NG0019360.1 Flavonoid FNS medium borderline
Pvir09NG0019370.1 Flavonoid FNS medium borderline
Pvir09NG0020380.1 Flavonoid FNS medium borderline
Pvir01KG0012240.1 Flavonoid IFR low borderline
Pvir01KG0012240.2 Flavonoid IFR low borderline
Pvir01KG0012240.3 Flavonoid IFR low borderline
Pvir01KG0012240.4 Flavonoid IFR low borderline
Pvir01KG0012240.5 Flavonoid IFR low borderline
Pvir01KG0012240.6 Flavonoid IFR low borderline
Pvir01KG0012240.7 Flavonoid IFR low borderline
Pvir01KG0035450.1 Flavonoid IFR high pass
Pvir01KG0044210.1 Flavonoid IFR low borderline
Pvir01KG0045700.1 Flavonoid IFR low borderline
Pvir01KG0045700.2 Flavonoid IFR low borderline
Pvir01KG0045700.3 Flavonoid IFR low borderline
Pvir01KG0045700.4 Flavonoid IFR low borderline
Pvir01NG0003310.1 Flavonoid IFR low borderline
Pvir01NG0011170.1 Flavonoid IFR low borderline
Pvir01NG0034190.1 Flavonoid IFR high pass
Pvir01NG0042640.1 Flavonoid IFR low borderline
Pvir01NG0042640.2 Flavonoid IFR low borderline
Pvir01NG0044100.10 Flavonoid IFR low borderline
Pvir01NG0044100.2 Flavonoid IFR low borderline
Pvir01NG0044100.3 Flavonoid IFR low borderline
Pvir01NG0044100.4 Flavonoid IFR low borderline
Pvir01NG0044100.5 Flavonoid IFR low borderline
Pvir01NG0044100.6 Flavonoid IFR low borderline
Pvir01NG0044100.7 Flavonoid IFR low borderline
Pvir01NG0044100.8 Flavonoid IFR low borderline
Pvir02KG0000010.1 Flavonoid IFR low borderline
Pvir02KG0021970.1 Flavonoid IFR low borderline
Pvir02KG0023110.1 Flavonoid IFR low borderline
Pvir02KG0051480.1 Flavonoid IFR low borderline